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Register a new userEquilibrium conformation of polymer chains with noncircular cross section
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In this paper we derive the general equilibrium equations of a polymer chain with a noncircular cross section by the variation of the free energy functional. From the equilibrium equation of the elastic ribbon we derive analytically the equilibrium conformations both of the helical ribbons and the twisted ribbons. We find that the pitch angle of the helical ribbons depends on the ratio of the torsional rigidity to the bending one. For the twisted ribbons, the rotation rate depends on the spontaneous torsion, which is determined by the elastic properties of the polymers. Our results for helical and twisted ribbons strongly indicate that the formation of these structures is determined by their elastic properties.
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Conformation-dependent design of polymer sequences can be considered as a tool to control macromolecular self-assembly. We consider the monomer unit sequences created via the modification of polymers in a homogeneous melt in accordance with the spatial positions of the monomer units. The geometrical patterns of lamellae, hexagonally packed cylinders, and balls arranged in a body-centered cubic lattice are considered as typical microphase-separated morphologies of block copolymers. Random trajectories of polymer chains are described by the diffusion-type equations and, in parallel, simulated in the computer modeling. The probability distributions of block length $k$, which are analogous to the first-passage probabilities, are calculated analytically and determined from the computer simulations. In any domain, the probability distribution can be described by the asymptote $~k^{-3/2}$ at moderate values of $k$ if the spatial size of the block is less than the smallest characteristic size of the domain. For large blocks, the exponential asymptote $exp(-const , k a^2/d_{as}^2)$ is valid, $d_{as}$ being the asymptotic domain length (a is the monomer unit size). The number average block lengths and their dispersities change linearly with the block length for lamellae, cylinders, and balls, when the domain is characterized by a single characteristic size. If the domain is described by more than one size, the number average block length can grow nonlinearly with the domain sizes and the length das can depend on all of them.
Adsorption of polymers to surfaces is crucial for understanding many fundamental processes in nature. Recent experimental studies indicate that the adsorption dynamics is dominated by non-equilibrium effects. We investigate the adsorption of a single polymer of length $N$ to a planar solid surface in the absence of hydrodynamic interactions. We find that for weak adsorption energies the adsorption time scales $ sim N^{(1+2 u)/(1+ u)}$, where $ u$ is the Flory exponent for the polymer. We argue that in this regime the single chain adsorption is closely related to a field-driven polymer translocation through narrow pores. Surprisingly, for high adsorption energies the adsorption time becomes longer, as it scales $sim N^{(1+ u)}$, which is explained by strong stretching of the unadsorbed part of the polymer close to the adsorbing surface. These two dynamic regimes are separated by an energy scale that is characterised by non-equilibrium contributions during the adsorption process.
Conformational transitions of flexible molecules, especially those driven by hydrophobic effects, tend to be hindered by desolvation barriers. For such transitions, it is thus important to characterize and understand the interplay between solvation and conformation. Using specialized molecular simulations, here we perform such a characterization for a hydrophobic polymer solvated in water. We find that an external potential, which unfavorably perturbs the polymer hydration waters, can trigger a coil-to-globule or collapse transition, and that the relative stabilities of the collapsed and extended states can be quantified by the strength of the requisite potential. Our results also provide mechanistic insights into the collapse transition, highlighting that polymer collapse proceeds through the formation of a sufficiently large non-polar cluster, and that collective water density fluctuations play an important role in stabilizing such a cluster. We also study the collapse of the hydrophobic polymer in octane, a non-polar solvent, and interestingly, we find that the mechanistic details of the transition are qualitatively similar to that in water.
We present the first experimental study on the simultaneous capillary instability amongst viscous concentric rings suspended atop an immiscible medium. The rings ruptured upon annealing, with three types of phase correlation between neighboring rings. In the case of weak substrate confinement, the rings ruptured independently when they were sparsely distanced, but via an out-of-phase mode when packed closer. If the substrate confinement was strong, the rings would rupture via an in-phase mode, resulting in radially aligned droplets. The concentric ring geometry caused a competition between the phase correlation of neighboring rings and the kinetically favorable wavelength, yielding an intriguing, recursive surface pattern. This frustrated pattern formation behavior was accounted for by a scaling analysis.
The phase diagram of star polymer solutions in a good solvent is obtained over a wide range of densities and arm numbers by Monte Carlo simulations. The effective interaction between the stars is modeled by an ultrasoft pair potential which is logarithmic in the core-core distance. Among the stable phases are a fluid as well as body-centered cubic, face-centered cubic, body-centered orthogonal, and diamond crystals. In a limited range of arm numbers, reentrant melting and reentrant freezing transitions occur for increasing density.
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