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Gamete recognition and complementary haplotypes in sexual Penna ageing model

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 Added by Dietrich Stauffer
 Publication date 2007
  fields Biology
and research's language is English




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In simulations of sexual reproduction with diploid individuals, we introduce that female haploid gametes recognize one specific allele of the genomes as a marker of the male haploid gametes. They fuse to zygotes preferrably with male gametes having a different marker than their own. This gamete recognition enhances the advantage of complementary bit-strings in the simulated diploid individuals, at low recombination rates. Thus with rare recombinations the bit-string evolve to be complementary; with recombination rate above about 0.1 instead they evolve under Darwinian purification selection, with few bits mutated.



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The standard Penna ageing model with sexual reproduction is enlarged by adding additional bit-strings for love: Marriage happens only if the male love strings are sufficiently different from the female ones. We simulate at what level of required difference the population dies out.
If in the sexual Penna ageing model conditions are applied leading to complementary bit-strings, then marriages between brothers and sisters, or between close cousins, may lead to more offspring than for unrelated couples.
378 - K. Bonkowska , M. Kula , S. Cebrat 2007
The population in the sexual Penna ageing model is first separated into several reproductively isolated groups. Then, after equilibration, sexual mixing between the groups is allowed. We study the changes in the population size due to this mixing and interpret them through a counterplay of purifying selection and of haplotype complementarity.
This paper develops mathematical models describing the evolutionary dynamics of both asexually and sexually reproducing populations of diploid unicellular organisms. We consider two forms of genome organization. In one case, we assume that the genome consists of two multi-gene chromosomes, while in the second case we assume that each gene defines a separate chromosome. If the organism has $ l $ homologous pairs that lack a functional copy of the given gene, then the fitness of the organism is $ kappa_l $. The $ kappa_l $ are assumed to be monotonically decreasing, so that $ kappa_0 = 1 > kappa_1 > kappa_2 > ... > kappa_{infty} = 0 $. For nearly all of the reproduction strategies we consider, we find, in the limit of large $ N $, that the mean fitness at mutation-selection balance is $ max{2 e^{-mu} - 1, 0} $, where $ N $ is the number of genes in the haploid set of the genome, $ epsilon $ is the probability that a given DNA template strand of a given gene produces a mutated daughter during replication, and $ mu = N epsilon $. The only exception is the sexual reproduction pathway for the multi-chromosomed genome. Assuming a multiplicative fitness landscape where $ kappa_l = alpha^{l} $ for $ alpha in (0, 1) $, this strategy is found to have a mean fitness that exceeds the mean fitness of all of the other strategies. Furthermore, while the other reproduction strategies experience a total loss of viability due to the steady accumulation of deleterious mutations once $ mu $ exceeds $ ln 2 $, no such transition occurs in the sexual pathway. The results of this paper demonstrate a selective advantage for sexual reproduction with fewer and much less restrictive assumptions than previous work.
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