Tracking microsctructural changes in the developing brain relies on accurate inter-subject image registration. However, most methods rely on either structural or diffusion data to learn the spatial correspondences between two or more images, without taking into account the complementary information provided by using both. Here we propose a deep learning registration framework which combines the structural information provided by T2-weighted (T2w) images with the rich microstructural information offered by diffusion tensor imaging (DTI) scans. We perform a leave-one-out cross-validation study where we compare the performance of our multi-modality registration model with a baseline model trained on structural data only, in terms of Dice scores and differences in fractional anisotropy (FA) maps. Our results show that in terms of average Dice scores our model performs better in subcortical regions when compared to using structural data only. Moreover, average sum-of-squared differences between warped and fixed FA maps show that our proposed model performs better at aligning the diffusion data.
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