Superconducting, flux-based qubits are promising candidates for the construction of a large scale quantum computer. We present an explicit quantum mechanical calculation of the coherent behavior of a flux based quantum bit in a noisy experimental environment such as an integrated circuit containing bias and control electronics. We show that non-thermal noise sources, such as bias current fluctuations and magnetic coupling to nearby active control circuits, will cause decoherence of a flux-based qubit on a timescale comparable to recent experimental coherence time measurements.