It is known that the coordinate ring of the Grassmannian has a cluster structure, which is induced from the combinatorial structure of a plabic graph. A plabic graph is a certain bipartite graph described on the disk, and there is a family of plabic graphs giving a cluster structure of the same Grassmannian. Such plabic graphs are related by the operation called square move which can be considered as the mutation in cluster theory. By using a plabic graph, we also obtain the Newton-Okounkov polytope which gives a toric degeneration of the Grassmannian. The purposes of this article is to survey these phenomena and observe the behavior of Newton-Okounkov polytopes under the operation called the combinatorial mutation of polytopes. In particular, we reinterpret some operations defined for Newton-Okounkov polytopes using the combinatorial mutation.
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