Uncertainties and errors in magnetic equilibrium reconstructions are a wide-spread problem in interpreting experimental data measured in the tokamak edge. This study demonstrates errors in EFIT++ reconstructions performed on the COMPASS tokamak by comparing the outer midplane separatrix position to the Velocity Shear Layer (VSL) position. The VSL is detected as the plasma potential peak measured by a reciprocating ball-pen probe. A subsequent statistical analysis of nearly 400 discharges shows a strong systematic trend in the reconstructed separatrix position relative to the VSL, where the primary factors are plasma triangularity and the magnetic axis radial position. This dependency is significantly reduced after the measuring coils positions as recorded in EFIT input are optimised to provide a closer match between the synthetic coil signal calculated by the Biot-Savart law in a vacuum discharge and the actual coil signal. In conclusion, we suggest that applying this optimisation may lead to more accurate and reliable reconstructions of the COMPASS equilibrium, which would have a positive impact on the accuracy of measurement analysis performed in the edge plasma.