We prove that rationally connected Calabi--Yau 3-folds with kawamata log terminal (klt) singularities form a birationally bounded family, or more generally, rationally connected $3$-folds of $epsilon$-CY type form a birationally bounded family for $epsilon>0$. Moreover, we show that the set of $epsilon$-lc log Calabi--Yau pairs $(X, B)$ with coefficients of $B$ bounded away from zero is log bounded modulo flops. As a consequence, we deduce that rationally connected klt Calabi--Yau $3$-folds with mld bounded away from $1$ are bounded modulo flops.