Focal Ration Degradation (FRD) is a change in light angular distribution caused by fiber optics. FRD is important to fiber-fed, spectroscopic astronomical systems because it can cause loss of signal, degradation in spectral resolution, or increased complexity in spectrograph design. Laboratorio Nacional de Astrofisica (LNA) has developed a system that can accurately and precisely measures FRD, using an absolute method that can also measure fiber throughput. This paper describes the metrology system and shows measurements of Polymicro fiber FBP129168190, FBP127165190 and Fujikura fiber 128170190. Although the FRD of the two fibers are low and similar to one another, it is very important to know the exact characteristics of these fibers since both will be used in the construction of FOCCoS (Fiber Optical Cable and Connectors System) for PFS (Prime Focus Spectrograph) to be installed at the Subaru telescope.