The evolution properties of Yukawa couplings and quark mixings are performed for the one-loop renormalization group equations in the Universal Extra Dimension (UED) model. It is found that the UED model has a substantial effect on the scaling of the fermion masses, including both quark and lepton sectors, whilst the radiative effects on the unitarity triangle is not a sensitive test in this model. Also, for this model, the renormalization invariants $R_{13}$ and $R_{23}$ describe the correlation between the mixing angles and mass ratios to a good approximation, with a variation of the order of $lambda^4$ and $lambda^5$ under energy scaling respectively.
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