We investigate the effect of the anisotropy between the s-wave scattering lengths of a three-component atomic Fermi gas loaded into a one-dimensional optical lattice. We find four different phases which support trionic instabilities made of bound states of three fermions. These phases distinguish themselves by the relative phases between the 2$k_F$ atomic density waves fluctuations of the three species. At small enough densities or strong anisotropies we give further evidences for a decoupling and the stabilization of more conventional BCS phases. Finally our results are discussed in light of a recent experiment on $^{6}$Li atoms.
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