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In previous work, the dynamics of the elastic rod was recast in a Lax pair formulation, with fiducial arc length s and time t as continuous independent variables. However, the solution of these equations cannot apply directly to a system where the fiducial arc length s is a discrete variable. In this paper, we show how to discretize the continuous s variable in a way that preserves the integrability of the original system. The t parameter is not discretized, so this algorithm will be especially useful for solutions of the s-discrete and t-continuous elastic rod problem, as may occur in problems where the polymeric structure of the DNA is made explicit.
We introduce a spectral parameter into the geometrically exact Hamiltonian equations for the elastic rod in a way that creates a Lax pair. This assures integrability and permits application of the inverse scattering transform solution method. If the
Hirotas bilinear approach is a very effective method to construct solutions for soliton systems. In terms of this method, the nonlinear equations can be transformed into linear equations, and can be solved by using perturbation method. In this paper,
We consider two infinite classes of ordinary difference equations admitting Lax pair representation. Discrete equations in these classes are parameterized by two integers $kgeq 0$ and $sgeq k+1$. We describe the first integrals for these two classes
To study the elastic properties of rod-like DNA nanostructures, we perform long simulations of these structure using the oxDNA coarse-grained model. By analysing the fluctuations in these trajectories we obtain estimates of the bend and twist persist
We consider equations in the modified KdV (mKdV) hierarchy and make use of the Miura transformation to construct expressions for their Lax pair. We derive a Lagrangian-based approach to study the bi-Hamiltonian structure of the mKdV equations. We als