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Human coders assign standardized medical codes to clinical documents generated during patients hospitalization, which is error-prone and labor-intensive. Automated medical coding approaches have been developed using machine learning methods such as deep neural networks. Nevertheless, automated medical coding is still challenging because of the imbalanced class problem, complex code association, and noise in lengthy documents. To solve these difficulties, we propose a novel neural network called Multi-task Balanced and Recalibrated Neural Network. Significantly, the multi-task learning scheme shares the relationship knowledge between different code branches to capture the code association. A recalibrated aggregation module is developed by cascading convolutional blocks to extract high-level semantic features that mitigate the impact of noise in documents. Also, the cascaded structure of the recalibrated module can benefit the learning from lengthy notes. To solve the class imbalanced problem, we deploy the focal loss to redistribute the attention of low and high-frequency medical codes. Experimental results show that our proposed model outperforms competitive baselines on a real-world clinical dataset MIMIC-III.
Medical coding translates professionally written medical reports into standardized codes, which is an essential part of medical information systems and health insurance reimbursement. Manual coding by trained human coders is time-consuming and error-
In this paper we propose a multi-task sequence prediction system, based on recurrent neural networks and used to annotate on multiple levels an Arabizi Tunisian corpus. The annotation performed are text classification, tokenization, PoS tagging and e
Medical code assignment, which predicts medical codes from clinical texts, is a fundamental task of intelligent medical information systems. The emergence of deep models in natural language processing has boosted the development of automatic assignme
Medical code assignment from clinical text is a fundamental task in clinical information system management. As medical notes are typically lengthy and the medical coding systems code space is large, this task is a long-standing challenge. Recent work
Automatic speech recognition (ASR) systems in the medical domain that focus on transcribing clinical dictations and doctor-patient conversations often pose many challenges due to the complexity of the domain. ASR output typically undergoes automatic