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Baryon Acoustic Oscillation (BAO) surveys will be a leading method for addressing the dark energy challenge in the next decade. We explore in detail the effect of allowing for small amplitude admixtures of general isocurvature perturbations in addition to the dominant adiabatic mode. We find that non-adiabatic initial conditions leave the sound speed unchanged but instead excite different harmonics. These harmonics couple differently to Silk damping, altering the form and evolution of acoustic waves in the baryon-photon fluid prior to decoupling. This modifies not only the scale on which the sound waves imprint onto the baryon distribution, which is used as the standard ruler in BAO surveys, but also the shape, width and height of the BAO peak. We discuss these effects in detail and show how more general initial conditions impact our interpretation of cosmological data in dark energy studies. We find that the inclusion of these additional isocurvature modes leads to an increase in the Dark Energy Task Force Figure of merit by 140% and 60% for the BOSS and ADEPT experiments respectively when considered in conjunction with Planck data. We also show that the incorrect assumption of adiabaticity has the potential to bias our estimates of the dark energy parameters by $3sigma$ ($1sigma$) for a single correlated isocurvature mode, and up to $8sigma$ ($3sigma$) for three correlated isocurvature modes in the case of the BOSS (ADEPT) experiment. We find that the use of the large scale structure data in conjunction with CMB data improves our ability to measure the contributions of different modes to the initial conditions by as much as 100% for certain modes in the fully correlated case.
Compensated isocurvature perturbations (CIPs) are opposite spatial fluctuations in the baryon and dark matter density. They can be generated for example in the curvaton model in the early Universe but are difficult to observe because their gravitatio
Dark radiation (DR) appears as a new physics candidate in various scenarios beyond the Standard Model. While it is often assumed that perturbations in DR are adiabatic, they can easily have an isocurvature component if more than one field was present
The recent Cosmic Microwave Background data from the Planck satellite experiment, when combined with HST determinations of the Hubble constant, are compatible with a larger, non-standard, number of relativistic degrees of freedom at recombination, pa
We study non-Gaussian properties of the isocurvature perturbations in the dark radiation, which consists of the active neutrinos and extra light species, if exist. We first derive expressions for the bispectra of primordial perturbations which are mi
A compensated isocurvature perturbation consists of an overdensity (or underdensity) in the cold dark matter which is completely cancelled out by a corresponding underdensity (or overdensity) in the baryons. Such a configuration may be generated by a