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Common Spacial Patterns (CSP) is a widely used method to analyse electroencephalography (EEG) data, concerning the supervised classification of brains activity. More generally, it can be useful to distinguish between multivariate signals recorded during a time span for two different classes. CSP is based on the simultaneous diagonalization of the average covariance matrices of signals from both classes and it allows to project the data into a low-dimensional subspace. Once data are represented in a low-dimensional subspace, a classification step must be carried out. The original CSP method is based on the Euclidean distance between signals and here, we extend it so that it can be applied on any appropriate distance for data at hand. Both, the classical CSP and the new Distance-Based CSP (DB-CSP) are implemented in an R package, called dbcsp.
This document describes the R package UBL that allows the use of several methods for handling utility-based learning problems. Classification and regression problems that assume non-uniform costs and/or benefits pose serious challenges to predictive
When implementing functionality which requires sparse matrices, there are numerous storage formats to choose from, each with advantages and disadvantages. To achieve good performance, several formats may need to be used in one program, requiring expl
This paper is dedicated to the R package FMM which implements a novel approach to describe rhythmic patterns in oscillatory signals. The frequency modulated Mobius (FMM) model is defined as a parametric signal plus a gaussian noise, where the signal
Convolutional neural networks, the state of the art for image segmentation, have been successfully applied to histology images by many computational researchers. However, the translatability of this technology to clinicians and biological researchers
Adherent biological cells generate traction forces on a substrate that play a central role for migration, mechanosensing, differentiation, and collective behavior. The established method for quantifying this cell-substrate interaction is traction for