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Instance segmentation of overlapping objects in biomedical images remains a largely unsolved problem. We take up this challenge and present MultiStar, an extension to the popular instance segmentation method StarDist. The key novelty of our method is that we identify pixels at which objects overlap and use this information to improve proposal sampling and to avoid suppressing proposals of truly overlapping objects. This allows us to apply the ideas of StarDist to images with overlapping objects, while incurring only a small overhead compared to the established method. MultiStar shows promising results on two datasets and has the advantage of using a simple and easy to train network architecture.
We present a novel method, called CenterPoly, for real-time instance segmentation using bounding polygons. We apply it to detect road users in dense urban environments, making it suitable for applications in intelligent transportation systems like au
Cell instance segmentation in Pap smear image remains challenging due to the wide existence of occlusion among translucent cytoplasm in cell clumps. Conventional methods heavily rely on accurate nuclei detection results and are easily disturbed by mi
Panoptic segmentation requires segments of both things (countable object instances) and stuff (uncountable and amorphous regions) within a single output. A common approach involves the fusion of instance segmentation (for things) and semantic segment
We propose a simple yet effective framework for instance and panoptic segmentation, termed CondInst (conditional convolutions for instance and panoptic segmentation). In the literature, top-performing instance segmentation methods typically follow th
Recent advances in bioimaging have provided scientists a superior high spatial-temporal resolution to observe dynamics of living cells as 3D volumetric videos. Unfortunately, the 3D biomedical video analysis is lagging, impeded by resource insensitiv