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In preparation for the IGM tomography study by Subaru Prime Focus Spectrograph (PFS) survey and other large future telescopes such as TMT/ELT/GMT, we present the results of our pilot study on Ly$alpha$ forest and IGM tomography statistics using the GADGET3-OSAKA cosmological smoothed particle hydrodynamical simulation. Our simulation includes models for star formation and supernova feedback, which enables more realistic cross-correlation studies between galaxies, neutral hydrogen (HI) and metals in circumgalactic and intergalactic medium. We create a light-cone data set at $z=2-3$ from our simulations and generate mock Ly$alpha$ forest data. As a first step, in this paper, we focus on the distribution of HI and galaxies, and present statistical results on 1D flux PDF, 1D power spectrum, flux contrast vs. impact parameter, HI$-$galaxy cross-correlations. Our results show overall agreement with current observational data, with some interesting discrepancies on small scales that are due to either feedback effects or varying observational conditions. Our simulation shows stronger HI absorption with decreasing transverse distance from galaxies. We find that the massive galaxies with $M_star ge 10^{10},M_odot$ contribute strongly to the flux contrast signal, and that the lower-mass galaxies with $M_star sim 10^8-10^{10},M_odot$ tend to dilute the flux contrast signal from massive galaxies. On large scales, the average flux contrast smoothly connects to the IGM level, supporting the concordance $Lambda$ cold dark matter model. We also find an increase in the HI absorption toward the center of a protocluster.
Mapping of the large-scale structure through cosmic time has numerous applications in the studies of cosmology and galaxy evolution. At $z > 2$, the structure can be traced by the neutral intergalactic medium (IGM) by way of observing the Ly$alpha$,
(abridged) Observing the signature of accretion from the intergalactic medium (IGM) onto galaxies at z~3 requires the detection of faint (L<<L*) galaxies embedded in a filamentary matrix of low-density, metal-poor gas coherent over hundreds of kpc. W
The correlation between neutral Hydrogen (HI) in the intergalactic medium (IGM) and galaxies now attracts great interests. We select four fields which include several coherently strong Ly$alpha$ absorption systems at $zsim2.2$ detected by using backg
The Ly$alpha$ forest transmission probability distribution function (PDF) is an established probe of the intergalactic medium (IGM) astrophysics, especially the temperature-density relationship of the IGM. We measure the transmission PDF from 3393 Ba
Forming a three dimensional view of the Universe is a long-standing goal of astronomical observations, and one that becomes increasingly difficult at high redshift. In this paper we discuss how tomography of the intergalactic medium (IGM) at $zsimeq