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Molecular dynamics simulation is used to study vacancy cluster formation in $beta$- and $alpha$-$Si_3N_4$ with varying vacancy contents (0 - 25.6 at%). Vacancies are randomly created in supercells, which were subsequently heat-treated for 114 nanoseconds. The results show that both $beta$ and $alpha$ can tolerate vacancies up to 12.8 at% and form clusters, confirming previous experimental data indicating 8 at% vacancy in $alpha$-$Si_3N_4$. However, 25.6 at% vacancy in $beta$ results in complete amorphization, while the same amount in $alpha$ results in a transformation of a semi-amorphous $alpha$ phase to a defective $beta$ phase, leading to the removal of the clusters in newly formed $beta$. This clearly explains why cluster vacancies are not experimentally observed in $beta$, considering that $beta$-$Si_3N_4$ ceramics are produced from $alpha$. Furthermore, the lattice parameters of both modifications increase with increasing vacancy content, revealing the cause of different lattice constants that were previously reported for $alpha$-$Si_3N_4$.
Recent experiments with amyloid-beta (Abeta) peptide suggest that formation of toxic oligomers may be an important contribution to the onset of Alzheimers disease. The toxicity of Abeta oligomers depends on their structure, which is governed by assem
By using molecular dynamics simulation, formation mechanisms of amorphous carbon in particular sp${}^3$ rich structure was researched. The problem that reactive empirical bond order potential cannot represent amorphous carbon properly was cleared in
Ab initio molecular dynamics simulations using VASP was employed to calculate threshold displacement energies and defect formation energies of Y4Zr3O12 {delta}-phase, which is the most commonly found phase in newly developed Zr and Al-containing ODS
Endothelial cells are responsible for the formation of the capillary blood vessel network. We describe a system of endothelial cells by means of two-dimensional molecular dynamics simulations of point-like particles. Cells motion is governed by the g
Point defects in crystalline materials often occur in multiple charge states. Although many experimental methods to study and explore point defects are available, techniques to explore the non-equilibrium dynamics of the charge states of these defect