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We consider the problem of computing a shortest solid cover of an indeterminate string. An indeterminate string may contain non-solid symbols, each of which specifies a subset of the alphabet that could be present at the corresponding position. We also consider covering partial words, which are a special case of indeterminate strings where each non-solid symbol is a dont care symbol. We prove that indeterminate string covering problem and partial word covering problem are NP-complete for binary alphabet and show that both problems are fixed-parameter tractable with respect to $k$, the number of non-solid symbols. For the indeterminate string covering problem we obtain a $2^{O(k log k)} + n k^{O(1)}$-time algorithm. For the partial word covering problem we obtain a $2^{O(sqrt{k}log k)} + nk^{O(1)}$-time algorithm. We prove that, unless the Exponential Time Hypothesis is false, no $2^{o(sqrt{k})} n^{O(1)}$-time solution exists for either problem, which shows that our algorithm for this case is close to optimal. We also present an algorithm for both problems which is feasible in practice.
Given an indeterminate string pattern $p$ and an indeterminate string text $t$, the problem of order-preserving pattern matching with character uncertainties ($mu$OPPM) is to find all substrings of $t$ that satisfy one of the possible orderings defin
A factor $u$ of a word $w$ is a cover of $w$ if every position in $w$ lies within some occurrence of $u$ in $w$. A word $w$ covered by $u$ thus generalizes the idea of a repetition, that is, a word composed of exact concatenations of $u$. In this art
In the Metric Capacitated Covering (MCC) problem, given a set of balls $mathcal{B}$ in a metric space $P$ with metric $d$ and a capacity parameter $U$, the goal is to find a minimum sized subset $mathcal{B}subseteq mathcal{B}$ and an assignment of th
Covering problems are fundamental classical problems in optimization, computer science and complexity theory. Typically an input to these problems is a family of sets over a finite universe and the goal is to cover the elements of the universe with a
We show algorithms for computing representative families for matroid intersections and use them in fixed-parameter algorithms for set packing, set covering, and facility location problems with multiple matroid constraints. We complement our tractability results by hardness results.