We show that the annihilation dynamics of excess quasi-particles in superconductors may result in the spontaneous formation of large spin-polarized clusters. This presents a novel scenario for spontaneous spin polarization. We estimate the relevant scales for aluminum, finding the feasibility of clusters with total spin $S simeq 10^4 hbar$ that could be spread over microns. The fluctuation dynamics of such large spins may be detected by measuring the flux noise in a loop hosting a cluster.