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Exit dynamics from Morse potential under thermal fluctuations

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 Added by Vipin P
 Publication date 2021
  fields Physics
and research's language is English




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We study the dynamics of a Brownian particle in Morse potential under thermal fluctuations, modeled by Gaussian white noise whose amplitude depends on absolute temperature. Dynamics of such a particle is investigated by numerically integrating the corresponding Langevin equation. From the mean first passage time (escape time), we study the dependence of Kramers rate on temperature and viscosity of the medium. An approximate expression for the reaction rate is found by solving differential equation for the mean first passage time. The expression shows a temperature dependent pre-factor for the Arrhenius equation. Our numerical simulations are in agreement with analytical approximations.



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Large fluctuations have received considerable attention as they encode information on the fine-scale dynamics. Large deviation relations known as fluctuation theorems also capture crucial nonequilibrium thermodynamical properties. Here we report that, using the technique of uniformization, the thermodynamic large deviation functions of continuous-time Markov processes can be obtained from Markov chains evolving in discrete time. This formulation offers new theoretical and numerical approaches to explore large deviation properties. In particular, the time evolution of autonomous and non-autonomous processes can be expressed in terms of a single Poisson rate. In this way the uniformization procedure leads to a simple and efficient way to simulate stochastic trajectories that reproduce the exact fluxes statistics. We illustrate the formalism for the current fluctuations in a stochastic pump model.
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