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Register a new userMap Generation from Large Scale Incomplete and Inaccurate Data Labels
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Rui Zhang
Publication date
2020
fields
Informatics Engineering
and research's language is
English
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Accurately and globally mapping human infrastructure is an important and challenging task with applications in routing, regulation compliance monitoring, and natural disaster response management etc.. In this paper we present progress in developing an algorithmic pipeline and distributed compute system that automates the process of map creation using high resolution aerial images. Unlike previous studies, most of which use datasets that are available only in a few cities across the world, we utilizes publicly available imagery and map data, both of which cover the contiguous United States (CONUS). We approach the technical challenge of inaccurate and incomplete training data adopting state-of-the-art convolutional neural network architectures such as the U-Net and the CycleGAN to incrementally generate maps with increasingly more accurate and more complete labels of man-made infrastructure such as roads and houses. Since scaling the mapping task to CONUS calls for parallelization, we then adopted an asynchronous distributed stochastic parallel gradient descent training scheme to distribute the computational workload onto a cluster of GPUs with nearly linear speed-up.
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The data-driven nature of deep learning models for semantic segmentation requires a large number of pixel-level annotations. However, large-scale and fully labeled medical datasets are often unavailable for practical tasks. Recently, partially supervised methods have been proposed to utilize images with incomplete labels to mitigate the data scarcity problem in the medical domain. As an emerging research area, the breakthroughs made by existing methods rely on either large-scale data or complex model design, which makes them 1) less practical for certain real-life tasks and 2) less robust for small-scale data. It is time to step back and think about the robustness of partially supervised methods and how to maximally utilize small-scale and partially labeled data for medical image segmentation tasks. To bridge the methodological gaps in label-efficient deep learning with partial supervision, we propose RAMP, a simple yet efficient data augmentation framework for partially supervised medical image segmentation by exploiting the assumption that patients share anatomical similarities. We systematically evaluate RAMP and the previous methods in various controlled multi-structure segmentation tasks. Compared to the mainstream approaches, RAMP consistently improves the performance of traditional segmentation networks on small-scale partially labeled data and utilize additional image-wise weak annotations.
Class imbalance and noisy labels are the norm rather than the exception in many large-scale classification datasets. Nevertheless, most works in machine learning typically assume balanced and clean data. There have been some recent attempts to tackle, on one side, the problem of learning from noisy labels and, on the other side, learning from long-tailed data. Each group of methods make simplifying assumptions about the other. Due to this separation, the proposed solutions often underperform when both assumptions are violated. In this work, we present a simple two-stage approach based on recent advances in self-supervised learning to treat both challenges simultaneously. It consists of, first, task-agnostic self-supervised pre-training, followed by task-specific fine-tuning using an appropriate loss. Most significantly, we find that self-supervised learning approaches are effectively able to cope with severe class imbalance. In addition, the resulting learned representations are also remarkably robust to label noise, when fine-tuned with an imbalance- and noise-resistant loss function. We validate our claims with experiments on CIFAR-10 and CIFAR-100 augmented with synthetic imbalance and noise, as well as the large-scale inherently noisy Clothing-1M dataset.
Critical aspects of computational imaging systems, such as experimental design and image priors, can be optimized through deep networks formed by the unrolled iterations of classical model-based reconstructions (termed physics-based networks). However, for real-world large-scale inverse problems, computing gradients via backpropagation is infeasible due to memory limitations of graphics processing units. In this work, we propose a memory-efficient learning procedure that exploits the reversibility of the networks layers to enable data-driven design for large-scale computational imaging systems. We demonstrate our method on a small-scale compressed sensing example, as well as two large-scale real-world systems: multi-channel magnetic resonance imaging and super-resolution optical microscopy.
Segmenting histology images into diagnostically relevant regions is imperative to support timely and reliable decisions by pathologists. To this end, computer-aided techniques have been proposed to delineate relevant regions in scanned histology slides. However, the techniques necessitate task-specific large datasets of annotated pixels, which is tedious, time-consuming, expensive, and infeasible to acquire for many histology tasks. Thus, weakly-supervised semantic segmentation techniques are proposed to utilize weak supervision that is cheaper and quicker to acquire. In this paper, we propose SegGini, a weakly supervised segmentation method using graphs, that can utilize weak multiplex annotations, i.e. inexact and incomplete annotations, to segment arbitrary and large images, scaling from tissue microarray (TMA) to whole slide image (WSI). Formally, SegGini constructs a tissue-graph representation for an input histology image, where the graph nodes depict tissue regions. Then, it performs weakly-supervised segmentation via node classification by using inexact image-level labels, incomplete scribbles, or both. We evaluated SegGini on two public prostate cancer datasets containing TMAs and WSIs. Our method achieved state-of-the-art segmentation performance on both datasets for various annotation settings while being comparable to a pathologist baseline.
Despite recent impressive results on single-object and single-domain image generation, the generation of complex scenes with multiple objects remains challenging. In this paper, we start with the idea that a model must be able to understand individual objects and relationships between objects in order to generate complex scenes well. Our layout-to-image-generation method, which we call Object-Centric Generative Adversarial Network (or OC-GAN), relies on a novel Scene-Graph Similarity Module (SGSM). The SGSM learns representations of the spatial relationships between objects in the scene, which lead to our models improved layout-fidelity. We also propose changes to the conditioning mechanism of the generator that enhance its object instance-awareness. Apart from improving image quality, our contributions mitigate two failure modes in previous approaches: (1) spurious objects being generated without corresponding bounding boxes in the layout, and (2) overlapping bounding boxes in the layout leading to merged objects in images. Extensive quantitative evaluation and ablation studies demonstrate the impact of our contributions, with our model outperforming previous state-of-the-art approaches on both the COCO-Stuff and Visual Genome datasets. Finally, we address an important limitation of evaluation metrics used in previous works by introducing SceneFID -- an object-centric adaptation of the popular Fr{e}chet Inception Distance metric, that is better suited for multi-object images.
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