We formulate computationally efficient classical stochastic measurement trajectories for a multimode quantum system under continuous observation. Specifically, we consider the nonlinear dynamics of an atomic Bose-Einstein condensate contained within an optical cavity subject to continuous monitoring of the light leaking out of the cavity. The classical trajectories encode within a classical phase-space representation a continuous quantum measurement process conditioned on a given detection record. We derive a Fokker-Planck equation for the quasi-probability distribution of the combined condensate-cavity system. We unravel the dynamics into stochastic classical trajectories that are conditioned on the quantum measurement process of the continuously monitored system, and that these trajectories faithfully represent measurement records of individual experimental runs. Since the dynamics of a continuously measured observable in a many-atom system can be closely approximated by classical dynamics, the method provides a numerically efficient and accurate approach to calculate the measurement record of a large multimode quantum system. Numerical simulations of the continuously monitored dynamics of a large atom cloud reveal considerably fluctuating phase profiles between different measurement trajectories, while ensemble averages exhibit local spatially varying phase decoherence. Individual measurement trajectories lead to spatial pattern formation and optomechanical motion that solely result from the measurement backaction. The backaction of the continuous quantum measurement process, conditioned on the detection record of the photons, spontaneously breaks the symmetry of the spatial profile of the condensate and can be tailored to selectively excite collective modes.
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