The aim of this in vitro study was to determine the effect of fissure types on the microleakage, and penetration ability of fissure sealant. The occlusal surface of ninety caries-free extracted human upper premolars were cleaned, etched and sealed with (UltraSeal XT Plus) Sealant. The sealed teeth were thermocycled then coated with two layers of nail varnish, leaving exposed a 1 mm window around the sealant margins and then immersed in 1% methylene blue for 24 hours. Each tooth was sectioned bucco-lingually and examined with a stereo microscope (40x magnification) for fissure types, microleakage, and penetration ability.