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Register a new userSimulation of cellular irradiation with the CENBG microbeam line using GEANT4
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Light-ion microbeams provide a unique opportunity to irradiate biological samples at the cellular level and to investigate radiobiological effects at low doses of high LET ionising radiation. Since 1998 a single-ion irradiation facility has been developed on the focused horizontal microbeam line of the CENBG 3.5 MV Van de Graaff accelerator. This setup delivers in air single protons and alpha particles of a few MeV onto cultured cells, with a spatial resolution of a few microns, allowing subcellular targeting. In this paper, we present results from the use of the GEANT4 toolkit to simulate cellular irradiation with the CENBG microbeam line, from the entrance to the microprobe up to the cellular medium.
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A three-dimensional unilateral contact problem for articular cartilage layers attached to subchondral bones shaped as elliptic paraboloids is considered in the framework of the biphasic cartilage model. The main novelty of the study is in accounting not only for the normal (vertical), but also for tangential vertical (horisontal) displacements of the contacting surfaces. Exact general relationships have been established between the contact approach and some integral characteristics of the contact pressure, including the contact force. Asymptotic representations for the contact pressure integral characteristics are obtained in terms of the contact approach and some integral characteristics of the contact zone. The main result is represented by the first-order approximation problem.
The Geant4-DNA project proposes to develop an open-source simulation software based and fully included in the general-purpose Geant4 Monte Carlo simulation toolkit. The main objective of this software is to simulate biological damages induced by ionising radiation at the cellular and sub-cellular scale. This project was originally initiated by the European Space Agency for the prediction of deleterious effects of radiation that may affect astronauts during future long duration space exploration missions. In this paper, the Geant4-DNA collaboration presents an overview of the whole ongoing project, including its most recent developments already available in the last Geant4 public release (9.3 BETA), as well as an illustration example simulating the direct irradiation of a chromatin fibre. Expected extensions involving several research domains, such as particle physics, chemistry and cellular and molecular biology, within a fully interdiciplinary activity of the Geant4 collaboration are also discussed.
Despite the spectacular achievements of molecular biology in the second half of the twentieth century and the crucial advances it permitted in cancer research, the fight against cancer has brought some disillusions. It is nowadays more and more apparent that getting a global picture of the very diverse and interlinked aspects of cancer development necessitates, in synergy with these achievements, other perspectives and investigating tools. In this undertaking, multidisciplinary approaches that include quantitative sciences in general and physics in particular play a crucial role. This `focus on collection contains 19 articles representative of the diversity and state-of-the-art of the contributions that physics can bring to the field of cancer research.
The effect of ultralow-frequency or static magnetic and electric fields on biological processes is of huge interest for researchers due to the resonant change of the intensity of biochemical reactions although the energy in such fields is small. A simplified model to study the effect of the weak magnetic and electrical fields on fluctuation of the random ionic currents in blood and to solve the $k_BT$ problem in magnetobiology is suggested. The analytic expression for the kinetic energy of the molecules dissolved in certain liquid media is obtained. The values of the magnetic field leading to resonant effects in capillaries are estimated. The numerical estimates showed that the resonant values of the energy of molecular in the capillaries and aorta are different: under identical conditions a molecule of the aorta gets $10^{-9}$ times less energy than the molecules in blood capillaries. So the capillaries are very sensitive to the resonant effect, with an approach to the resonant value of the magnetic field strength, the average energy of the molecule localized in the capillary is increased by several orders of magnitude as compared to its thermal energy, this value of the energy is sufficient for the deterioration of the chemical bonds.
Blood system functions are very diverse and important for most processes in human organism. One of its primary functions is matter transport among different parts of the organism including tissue supplying with oxygen, carbon dioxide excretion, drug propagation etc. Forecasting of these processes under normal conditions and in the presence of different pathologies like atherosclerosis, loss of blood, anatomical abnormalities, pathological changing in chemical transformations and others is significant issue for many physiologists. In this connection should be pointed out that global processes are of special interest as they include feedbacks and interdependences among different regions of the organism. Thus the main goal of this work is to develop the model allowing to describe effectively blood flow in the whole organism. As we interested in global processes the models of the four vascular trees (arterial and venous parts of systemic and pulmonary circulation) must be closed with heart and peripheral circulation models. As one of the model applications the processes of the blood loss is considered in the end of the paper.
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