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Register a new userDomiKnowS: A Library for Integration of Symbolic Domain Knowledge in Deep Learning
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Added by
Hossein Rajaby Faghihi
Publication date
2021
fields
Informatics Engineering
and research's language is
English
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We demonstrate a library for the integration of domain knowledge in deep learning architectures. Using this library, the structure of the data is expressed symbolically via graph declarations and the logical constraints over outputs or latent variables can be seamlessly added to the deep models. The domain knowledge can be defined explicitly, which improves the models explainability in addition to the performance and generalizability in the low-data regime. Several approaches for such an integration of symbolic and sub-symbolic models have been introduced; however, there is no library to facilitate the programming for such an integration in a generic way while various underlying algorithms can be used. Our library aims to simplify programming for such an integration in both training and inference phases while separating the knowledge representation from learning algorithms. We showcase various NLP benchmark tasks and beyond. The framework is publicly available at Github(https://github.com/HLR/DomiKnowS).
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We present Meta Learning for Knowledge Distillation (MetaDistil), a simple yet effective alternative to traditional knowledge distillation (KD) methods where the teacher model is fixed during training. We show the teacher network can learn to better transfer knowledge to the student network (i.e., learning to teach) with the feedback from the performance of the distilled student network in a meta learning framework. Moreover, we introduce a pilot update mechanism to improve the alignment between the inner-learner and meta-learner in meta learning algorithms that focus on an improved inner-learner. Experiments on various benchmarks show that MetaDistil can yield significant improvements compared with traditional KD algorithms and is less sensitive to the choice of different student capacity and hyperparameters, facilitating the use of KD on different tasks and models. The code is available at https://github.com/JetRunner/MetaDistil
Symbolic regression is a powerful technique that can discover analytical equations that describe data, which can lead to explainable models and generalizability outside of the training data set. In contrast, neural networks have achieved amazing levels of accuracy on image recognition and natural language processing tasks, but are often seen as black-box models that are difficult to interpret and typically extrapolate poorly. Here we use a neural network-based architecture for symbolic regression called the Equation Learner (EQL) network and integrate it with other deep learning architectures such that the whole system can be trained end-to-end through backpropagation. To demonstrate the power of such systems, we study their performance on several substantially different tasks. First, we show that the neural network can perform symbolic regression and learn the form of several functions. Next, we present an MNIST arithmetic task where a separate part of the neural network extracts the digits. Finally, we demonstrate prediction of dynamical systems where an unknown parameter is extracted through an encoder. We find that the EQL-based architecture can extrapolate quite well outside of the training data set compared to a standard neural network-based architecture, paving the way for deep learning to be applied in scientific exploration and discovery.
A key component of deep learning (DL) for natural language processing (NLP) is word embeddings. Word embeddings that effectively capture the meaning and context of the word that they represent can significantly improve the performance of downstream DL models for various NLP tasks. Many existing word embeddings techniques capture the context of words based on word co-occurrence in documents and text; however, they often cannot capture broader domain-specific relationships between concepts that may be crucial for the NLP task at hand. In this paper, we propose a method to integrate external knowledge from medical terminology ontologies into the context captured by word embeddings. Specifically, we use a medical knowledge graph, such as the unified medical language system (UMLS), to find connections between clinical terms in cancer pathology reports. This approach aims to minimize the distance between connected clinical concepts. We evaluate the proposed approach using a Multitask Convolutional Neural Network (MT-CNN) to extract six cancer characteristics -- site, subsite, laterality, behavior, histology, and grade -- from a dataset of ~900K cancer pathology reports. The results show that the MT-CNN model which uses our domain informed embeddings outperforms the same MT-CNN using standard word2vec embeddings across all tasks, with an improvement in the overall micro- and macro-F1 scores by 4.97%and 22.5%, respectively.
Knowledge graph (KG) representation learning methods have achieved competitive performance in many KG-oriented tasks, among which the best ones are usually based on graph neural networks (GNNs), a powerful family of networks that learns the representation of an entity by aggregating the features of its neighbors and itself. However, many KG representation learning scenarios only provide the structure information that describes the relationships among entities, causing that entities have no input features. In this case, existing aggregation mechanisms are incapable of inducing embeddings of unseen entities as these entities have no pre-defined features for aggregation. In this paper, we present a decentralized KG representation learning approach, decentRL, which encodes each entity from and only from the embeddings of its neighbors. For optimization, we design an algorithm to distill knowledge from the model itself such that the output embeddings can continuously gain knowledge from the corresponding original embeddings. Extensive experiments show that the proposed approach performed better than many cutting-edge models on the entity alignment task, and achieved competitive performance on the entity prediction task. Furthermore, under the inductive setting, it significantly outperformed all baselines on both tasks.
In this paper we introduce ZhuSuan, a python probabilistic programming library for Bayesian deep learning, which conjoins the complimentary advantages of Bayesian methods and deep learning. ZhuSuan is built upon Tensorflow. Unlike existing deep learning libraries, which are mainly designed for deterministic neural networks and supervised tasks, ZhuSuan is featured for its deep root into Bayesian inference, thus supporting various kinds of probabilistic models, including both the traditional hierarchical Bayesian models and recent deep generative models. We use running examples to illustrate the probabilistic programming on ZhuSuan, including Bayesian logistic regression, variational auto-encoders, deep sigmoid belief networks and Bayesian recurrent neural networks.
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