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Register a new userEnd-to-end Ultrasound Frame to Volume Registration
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Fusing intra-operative 2D transrectal ultrasound (TRUS) image with pre-operative 3D magnetic resonance (MR) volume to guide prostate biopsy can significantly increase the yield. However, such a multimodal 2D/3D registration problem is a very challenging task. In this paper, we propose an end-to-end frame-to-volume registration network (FVR-Net), which can efficiently bridge the previous research gaps by aligning a 2D TRUS frame with a 3D TRUS volume without requiring hardware tracking. The proposed FVR-Net utilizes a dual-branch feature extraction module to extract the information from TRUS frame and volume to estimate transformation parameters. We also introduce a differentiable 2D slice sampling module which allows gradients backpropagating from an unsupervised image similarity loss for content correspondence learning. Our model shows superior efficiency for real-time interventional guidance with highly competitive registration accuracy.
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One of the core components of conventional (i.e., non-learned) video codecs consists of predicting a frame from a previously-decoded frame, by leveraging temporal correlations. In this paper, we propose an end-to-end learned system for compressing video frames. Instead of relying on pixel-space motion (as with optical flow), our system learns deep embeddings of frames and encodes their difference in latent space. At decoder-side, an attention mechanism is designed to attend to the latent space of frames to decide how different parts of the previous and current frame are combined to form the final predicted current frame. Spatially-varying channel allocation is achieved by using importance masks acting on the feature-channels. The model is trained to reduce the bitrate by minimizing a loss on importance maps and a loss on the probability output by a context model for arithmetic coding. In our experiments, we show that the proposed system achieves high compression rates and high objective visual quality as measured by MS-SSIM and PSNR. Furthermore, we provide ablation studies where we highlight the contribution of different components.
Image compression is one of the most fundamental techniques and commonly used applications in the image and video processing field. Earlier methods built a well-designed pipeline, and efforts were made to improve all modules of the pipeline by handcrafted tuning. Later, tremendous contributions were made, especially when data-driven methods revitalized the domain with their excellent modeling capacities and flexibility in incorporating newly designed modules and constraints. Despite great progress, a systematic benchmark and comprehensive analysis of end-to-end learned image compression methods are lacking. In this paper, we first conduct a comprehensive literature survey of learned image compression methods. The literature is organized based on several aspects to jointly optimize the rate-distortion performance with a neural network, i.e., network architecture, entropy model and rate control. We describe milestones in cutting-edge learned image-compression methods, review a broad range of existing works, and provide insights into their historical development routes. With this survey, the main challenges of image compression methods are revealed, along with opportunities to address the related issues with recent advanced learning methods. This analysis provides an opportunity to take a further step towards higher-efficiency image compression. By introducing a coarse-to-fine hyperprior model for entropy estimation and signal reconstruction, we achieve improved rate-distortion performance, especially on high-resolution images. Extensive benchmark experiments demonstrate the superiority of our model in rate-distortion performance and time complexity on multi-core CPUs and GPUs. Our project website is available at https://huzi96.github.io/compression-bench.html.
The slow acquisition speed of magnetic resonance imaging (MRI) has led to the development of two complementary methods: acquiring multiple views of the anatomy simultaneously (parallel imaging) and acquiring fewer samples than necessary for traditional signal processing methods (compressed sensing). While the combination of these methods has the potential to allow much faster scan times, reconstruction from such undersampled multi-coil data has remained an open problem. In this paper, we present a new approach to this problem that extends previously proposed variational methods by learning fully end-to-end. Our method obtains new state-of-the-art results on the fastMRI dataset for both brain and knee MRIs.
High-frequency ultrasound (HFU) is well suited for imaging embryonic mice due to its noninvasive and real-time characteristics. However, manual segmentation of the brain ventricles (BVs) and body requires substantial time and expertise. This work proposes a novel deep learning based end-to-end auto-context refinement framework, consisting of two stages. The first stage produces a low resolution segmentation of the BV and body simultaneously. The resulting probability map for each object (BV or body) is then used to crop a region of interest (ROI) around the target object in both the original image and the probability map to provide context to the refinement segmentation network. Joint training of the two stages provides significant improvement in Dice Similarity Coefficient (DSC) over using only the first stage (0.818 to 0.906 for the BV, and 0.919 to 0.934 for the body). The proposed method significantly reduces the inference time (102.36 to 0.09 s/volume around 1000x faster) while slightly improves the segmentation accuracy over the previous methods using slide-window approaches.
We present an end-to-end trainable framework for P-frame compression in this paper. A joint motion vector (MV) and residual prediction network MV-Residual is designed to extract the ensembled features of motion representations and residual information by treating the two successive frames as inputs. The prior probability of the latent representations is modeled by a hyperprior autoencoder and trained jointly with the MV-Residual network. Specially, the spatially-displaced convolution is applied for video frame prediction, in which a motion kernel for each pixel is learned to generate predicted pixel by applying the kernel at a displaced location in the source image. Finally, novel rate allocation and post-processing strategies are used to produce the final compressed bits, considering the bits constraint of the challenge. The experimental results on validation set show that the proposed optimized framework can generate the highest MS-SSIM for P-frame compression competition.
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