Over complex numbers, the Fourier-Mukai partners of abelian varieties are well-understood. A celebrated result is Orlovs derived Torelli theorem. In this note, we study the FM-partners of abelian varieties in positive characteristic. We notice that, in odd characteristics, two abelian varieties of odd dimension are derived equivalent if their associated Kummer stacks are derived equivalent, which is Krug and Sosnas result over complex numbers. For abelian surfaces in odd characteristic, we show that two abelian surfaces are derived equivalent if and only if their associated Kummer surfaces are isomorphic. This extends the result [doi:10.1215/s0012-7094-03-12036-0] to odd characteristic fields, which solved a classical problem originally from Shioda. Furthermore, we establish the derived Torelli theorem for supersingular abelian varieties and apply it to characterize the quasi-liftable birational models of supersingular generalized Kummer varieties.
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