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Low Budget Active Learning via Wasserstein Distance: An Integer Programming Approach

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 Added by Rafid Mahmood
 Publication date 2021
and research's language is English




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Given restrictions on the availability of data, active learning is the process of training a model with limited labeled data by selecting a core subset of an unlabeled data pool to label. Although selecting the most useful points for training is an optimization problem, the scale of deep learning data sets forces most selection strategies to employ efficient heuristics. Instead, we propose a new integer optimization problem for selecting a core set that minimizes the discrete Wasserstein distance from the unlabeled pool. We demonstrate that this problem can be tractably solved with a Generalized Benders Decomposition algorithm. Our strategy requires high-quality latent features which we obtain by unsupervised learning on the unlabeled pool. Numerical results on several data sets show that our optimization approach is competitive with baselines and particularly outperforms them in the low budget regime where less than one percent of the data set is labeled.

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Recently a novel framework has been proposed for designing the molecular structure of chemical compounds using both artificial neural networks (ANNs) and mixed integer linear programming (MILP). In the framework, we first define a feature vector $f(C)$ of a chemical graph $C$ and construct an ANN that maps $x=f(C)$ to a predicted value $eta(x)$ of a chemical property $pi$ to $C$. After this, we formulate an MILP that simulates the computation process of $f(C)$ from $C$ and that of $eta(x)$ from $x$. Given a target value $y^*$ of the chemical property $pi$, we infer a chemical graph $C^dagger$ such that $eta(f(C^dagger))=y^*$ by solving the MILP. In this paper, we use linear regression to construct a prediction function $eta$ instead of ANNs. For this, we derive an MILP formulation that simulates the computation process of a prediction function by linear regression. The results of computational experiments suggest our method can infer chemical graphs with around up to 50 non-hydrogen atoms.
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