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Register a new userSelf-Supervised Graph Representation Learning via Topology Transformations
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Xiang Gao
Publication date
2021
fields
Informatics Engineering
and research's language is
English
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We present the Topology Transformation Equivariant Representation learning, a general paradigm of self-supervised learning for node representations of graph data to enable the wide applicability of Graph Convolutional Neural Networks (GCNNs). We formalize the proposed model from an information-theoretic perspective, by maximizing the mutual information between topology transformations and node representations before and after the transformations. We derive that maximizing such mutual information can be relaxed to minimizing the cross entropy between the applied topology transformation and its estimation from node representations. In particular, we seek to sample a subset of node pairs from the original graph and flip the edge connectivity between each pair to transform the graph topology. Then, we self-train a representation encoder to learn node representations by reconstructing the topology transformations from the feature representations of the original and transformed graphs. In experiments, we apply the proposed model to the downstream node and graph classification tasks, and results show that the proposed method outperforms the state-of-the-art unsupervised approaches.
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Graph neural networks~(GNNs) apply deep learning techniques to graph-structured data and have achieved promising performance in graph representation learning. However, existing GNNs rely heavily on enough labels or well-designed negative samples. To address these issues, we propose a new self-supervised graph representation method: deep graph bootstrapping~(DGB). DGB consists of two neural networks: online and target networks, and the input of them are different augmented views of the initial graph. The online network is trained to predict the target network while the target network is updated with a slow-moving average of the online network, which means the online and target networks can learn from each other. As a result, the proposed DGB can learn graph representation without negative examples in an unsupervised manner. In addition, we summarize three kinds of augmentation methods for graph-structured data and apply them to the DGB. Experiments on the benchmark datasets show the DGB performs better than the current state-of-the-art methods and how the augmentation methods affect the performances.
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This paper studies unsupervised/self-supervised whole-graph representation learning, which is critical in many tasks such as molecule properties prediction in drug and material discovery. Existing methods mainly focus on preserving the local similarity structure between different graph instances but fail to discover the global semantic structure of the entire data set. In this paper, we propose a unified framework called Local-instance and Global-semantic Learning (GraphLoG) for self-supervised whole-graph representation learning. Specifically, besides preserving the local similarities, GraphLoG introduces the hierarchical prototypes to capture the global semantic clusters. An efficient online expectation-maximization (EM) algorithm is further developed for learning the model. We evaluate GraphLoG by pre-training it on massive unlabeled graphs followed by fine-tuning on downstream tasks. Extensive experiments on both chemical and biological benchmark data sets demonstrate the effectiveness of the proposed approach.
In recent years, graph neural networks (GNNs) have been widely adopted in the representation learning of graph-structured data and provided state-of-the-art performance in various applications such as link prediction, node classification, and recommendation. Motivated by recent advances of self-supervision for representation learning in natural language processing and computer vision, self-supervised learning has been recently studied to leverage unlabeled graph-structured data. However, employing self-supervision tasks as auxiliary tasks to assist a primary task has been less explored in the literature on graphs. In this paper, we propose a novel self-supervised auxiliary learning framework to effectively learn graph neural networks. Moreover, this work is the first study showing that a meta-path prediction is beneficial as a self-supervised auxiliary task for heterogeneous graphs. Our method is learning to learn a primary task with various auxiliary tasks to improve generalization performance. The proposed method identifies an effective combination of auxiliary tasks and automatically balances them to improve the primary task. Our methods can be applied to any graph neural network in a plug-in manner without manual labeling or additional data. Also, it can be extended to any other auxiliary tasks. Our experiments demonstrate that the proposed method consistently improves the performance of node classification and link prediction.
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