A unifying graph theoretic framework for the modelling of metro transportation networks is proposed. This is achieved by first introducing a basic graph framework for the modelling of the London underground system from a diffusion law point of view. This forms a basis for the analysis of both station importance and their vulnerability, whereby the concept of graph vertex centrality plays a key role. We next explore k-edge augmentation of a graph topology, and illustrate its usefulness both for improving the network robustness and as a planning tool. Upon establishing the graph theoretic attributes of the underlying graph topology, we proceed to introduce models for processing data on such a metro graph. Commuter movement is shown to obey the Ficks law of diffusion, where the graph Laplacian provides an analytical model for the diffusion process of commuter population dynamics. Finally, we also explore the application of modern deep learning models, such as graph neural networks and hyper-graph neural networks, as general purpose models for the modelling and forecasting of underground data, especially in the context of the morning and evening rush hours. Comprehensive simulations including the passenger in- and out-flows during the morning rush hour in London demonstrates the advantages of the graph models in metro planning and traffic management, a formal mathematical approach with wide economic implications.
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