Do you want to publish a course? Click here

On the sharp interface limit of a phase field model for near-spherical two phase biomembranes

96   0   0.0 ( 0 )
 Added by Luke Hatcher
 Publication date 2020
  fields
and research's language is English




Ask ChatGPT about the research

We consider sharp interface asymptotics for a phase field model of two phase near spherical biomembranes involving a coupling between the local mean curvature and the local composition proposed by the first and second authors. The model is motivated by lipid raft formation. We introduce a reduced diffuse interface energy depending only on the membrane composition and derive the $Gamma-$limit. We demonstrate that the Euler-Lagrange equations for the limiting functional and the sharp interface energy coincide. Finally, we consider a system of gradient flow equations with conserved Allen-Cahn dynamics for the phase field model. Performing a formal asymptotic analysis we obtain a system of gradient flow equations for the sharp interface energy coupling geodesic curvature flow for the phase interface to a fourth order PDE free boundary problem for the surface deformation.



rate research

Read More

We formulate a general shape and topology optimization problem in structural optimization by using a phase field approach. This problem is considered in view of well-posedness and we derive optimality conditions. We relate the diffuse interface problem to a perimeter penalized sharp interface shape optimization problem in the sense of $Gamma$-convergence of the reduced objective functional. Additionally, convergence of the equations of the first variation can be shown. The limit equations can also be derived directly from the problem in the sharp interface setting. Numerical computations demonstrate that the approach can be applied for complex structural optimization problems.
115 - Xiaodi Zhang 2021
In this paper, we propose and analyze a diffuse interface model for inductionless magnetohydrodynamic fluids. The model couples a convective Cahn-Hilliard equation for the evolution of the interface, the Navier-Stokes system for fluid flow and the possion quation for electrostatics. The model is derived from Onsagers variational principle and conservation laws systematically. We perform formally matched asymptotic expansions and develop several sharp interface models in the limit when the interfacial thickness tends to zero. It is shown that the sharp interface limit of the models are the standard incompressible inductionless magnetohydrodynamic equations coupled with several different interface conditions for different choice of the mobilities. Numerical results verify the convergence of the diffuse interface model with different mobilitiess.
We derive and analyse an energy to model lipid raft formation on biological membranes involving a coupling between the local mean curvature and the local composition. We apply a perturbation method recently introduced by Fritz, Hobbs and the first author to describe the geometry of the surface as a graph over an undeformed Helfrich energy minimising surface. The result is a surface Cahn-Hilliard functional coupled with a small deformation energy We show that suitable minimisers of this energy exist and consider a gradient flow with conserved Allen-Cahn dynamics, for which existence and uniqueness results are proven. Finally, numerical simulations show that for the long time behaviour raft-like structures can emerge and stablise, and their parameter dependence is further explored.
We consider a model of a biomembrane with attached proteins. The membrane is represented by a near spherical continuous surface and attached proteins are described as discrete rigid structures which attach to the membrane at a finite number of points. The resulting surface minimises a quadratic elastic energy (obtained by a perturbation of the Canham-Helfrich energy) subject to the point constraints which are imposed by the attachment of the proteins. We calculate the derivative of the energy with respect to protein configurations. The proteins are constrained to move tangentially by translation and by rotation in the axis normal to a reference point. Previous studies have typically restricted themselves to a nearly flat membrane and circular inclusions. A numerically accessible representation of this derivative is derived and employed in some numerical experiments.
The use of continuum phase-field models to describe the motion of well-defined interfaces is discussed for a class of phenomena, that includes order/disorder transitions, spinodal decomposition and Ostwald ripening, dendritic growth, and the solidification of eutectic alloys. The projection operator method is used to extract the ``sharp interface limit from phase field models which have interfaces that are diffuse on a length scale $xi$. In particular,phase-field equations are mapped onto sharp interface equations in the limits $xi kappa ll 1$ and $xi v/D ll 1$, where $kappa$ and $v$ are respectively the interface curvature and velocity and $D$ is the diffusion constant in the bulk. The calculations provide one general set of sharp interface equations that incorporate the Gibbs-Thomson condition, the Allen-Cahn equation and the Kardar-Parisi-Zhang equation.
comments
Fetching comments Fetching comments
Sign in to be able to follow your search criteria
mircosoft-partner

هل ترغب بارسال اشعارات عن اخر التحديثات في شمرا-اكاديميا