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Register a new userAutomatic sampling and training method for wood-leaf classification based on tree terrestrial point cloud
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Added by
Pei Wang
Publication date
2020
fields
Informatics Engineering
and research's language is
English
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Terrestrial laser scanning technology provides an efficient and accuracy solution for acquiring three-dimensional information of plants. The leaf-wood classification of plant point cloud data is a fundamental step for some forestry and biological research. An automatic sampling and training method for classification was proposed based on tree point cloud data. The plane fitting method was used for selecting leaf sample points and wood sample points automatically, then two local features were calculated for training and classification by using support vector machine (SVM) algorithm. The point cloud data of ten trees were tested by using the proposed method and a manual selection method. The average correct classification rate and kappa coefficient are 0.9305 and 0.7904, respectively. The results show that the proposed method had better efficiency and accuracy comparing to the manual selection method.
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Terrestrial laser scanning (TLS) can obtain tree point cloud with high precision and high density. Efficient classification of wood points and leaf points is essential to study tree structural parameters and ecological characteristics. By using both the intensity and spatial information, a three-step classification and verification method was proposed to achieve automated wood-leaf classification. Tree point cloud was classified into wood points and leaf points by using intensity threshold, neighborhood density and voxelization successively. Experiment was carried in Haidian Park, Beijing, and 24 trees were scanned by using the RIEGL VZ-400 scanner. The tree point clouds were processed by using the proposed method, whose classification results were compared with the manual classification results which were used as standard results. To evaluate the classification accuracy, three indicators were used in the experiment, which are Overall Accuracy (OA), Kappa coefficient (Kappa) and Matthews correlation coefficient (MCC). The ranges of OA, Kappa and MCC of the proposed method are from 0.9167 to 0.9872, from 0.7276 to 0.9191, and from 0.7544 to 0.9211 respectively. The average values of OA, Kappa and MCC are 0.9550, 0.8547 and 0.8627 respectively. Time cost of wood-leaf classification was also recorded to evaluate the algorithm efficiency. The average processing time are 1.4 seconds per million points. The results showed that the proposed method performed well automatically and quickly on wood-leaf classification based on the experimental dataset.
In this paper, by modeling the point cloud registration task as a Markov decision process, we propose an end-to-end deep model embedded with the cross-entropy method (CEM) for unsupervised 3D registration. Our model consists of a sampling network module and a differentiable CEM module. In our sampling network module, given a pair of point clouds, the sampling network learns a prior sampling distribution over the transformation space. The learned sampling distribution can be used as a good initialization of the differentiable CEM module. In our differentiable CEM module, we first propose a maximum consensus criterion based alignment metric as the reward function for the point cloud registration task. Based on the reward function, for each state, we then construct a fused score function to evaluate the sampled transformations, where we weight the current and future rewards of the transformations. Particularly, the future rewards of the sampled transforms are obtained by performing the iterative closest point (ICP) algorithm on the transformed state. By selecting the top-k transformations with the highest scores, we iteratively update the sampling distribution. Furthermore, in order to make the CEM differentiable, we use the sparsemax function to replace the hard top-$k$ selection. Finally, we formulate a Geman-McClure estimator based loss to train our end-to-end registration model. Extensive experimental results demonstrate the good registration performance of our method on benchmark datasets.
An explainable machine learning method for point cloud classification, called the PointHop method, is proposed in this work. The PointHop method consists of two stages: 1) local-to-global attribute building through iterative one-hop information exchange, and 2) classification and ensembles. In the attribute building stage, we address the problem of unordered point cloud data using a space partitioning procedure and developing a robust descriptor that characterizes the relationship between a point and its one-hop neighbor in a PointHop unit. When we put multiple PointHop units in cascade, the attributes of a point will grow by taking its relationship with one-hop neighbor points into account iteratively. Furthermore, to control the rapid dimension growth of the attribute vector associated with a point, we use the Saab transform to reduce the attribute dimension in each PointHop unit. In the classification and ensemble stage, we feed the feature vector obtained from multiple PointHop units to a classifier. We explore ensemble methods to improve the classification performance furthermore. It is shown by experimental results that the PointHop method offers classification performance that is comparable with state-of-the-art methods while demanding much lower training complexity.
Design flow parameters are of utmost importance to chip design quality and require a painfully long time to evaluate their effects. In reality, flow parameter tuning is usually performed manually based on designers experience in an ad hoc manner. In this work, we introduce a machine learning-based automatic parameter tuning methodology that aims to find the best design quality with a limited number of trials. Instead of merely plugging in machine learning engines, we develop clustering and approximate sampling techniques for improving tuning efficiency. The feature extraction in this method can reuse knowledge from prior designs. Furthermore, we leverage a state-of-the-art XGBoost model and propose a novel dynamic tree technique to overcome overfitting. Experimental results on benchmark circuits show that our approach achieves 25% improvement in design quality or 37% reduction in sampling cost compared to random forest method, which is the kernel of a highly cited previous work. Our approach is further validated on two industrial designs. By sampling less than 0.02% of possible parameter sets, it reduces area by 1.83% and 1.43% compared to the best solutions hand-tuned by experienced designers.
Automatic leaf segmentation, as well as identification and classification methods that built upon it, are able to provide immediate monitoring for plant growth status to guarantee the output. Although 3D plant point clouds contain abundant phenotypic features, plant leaves are usually distributed in clusters and are sometimes seriously overlapped in the canopy. Therefore, it is still a big challenge to automatically segment each individual leaf from a highly crowded plant canopy in 3D for plant phenotyping purposes. In this work, we propose an overlapping-free individual leaf segmentation method for plant point clouds using the 3D filtering and facet region growing. In order to separate leaves with different overlapping situations, we develop a new 3D joint filtering operator, which integrates a Radius-based Outlier Filter (RBOF) and a Surface Boundary Filter (SBF) to help to separate occluded leaves. By introducing the facet over-segmentation and facet-based region growing, the noise in segmentation is suppressed and labeled leaf centers can expand to their whole leaves, respectively. Our method can work on point clouds generated from three types of 3D imaging platforms, and also suitable for different kinds of plant species. In experiments, it obtains a point-level cover rate of 97% for Epipremnum aureum, 99% for Monstera deliciosa, 99% for Calathea makoyana, and 87% for Hedera nepalensis sample plants. At the leaf level, our method reaches an average Recall at 100.00%, a Precision at 99.33%, and an average F-measure at 99.66%, respectively. The proposed method can also facilitate the automatic traits estimation of each single leaf (such as the leaf area, length, and width), which has potential to become a highly effective tool for plant research and agricultural engineering.
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