NGC1052-DF2 and NGC1052-DF4 are ultra-diffuse galaxies (UDGs) that were found to have extremely low velocity dispersions, indicating that they have little or no dark matter. Both galaxies host anomalously luminous globular cluster (GC) systems, with a peak magnitude of their GC luminosity function (GCLF) that is $sim1.5$ magnitudes brighter than the near-universal value of $M_V approx -7.5$. Here we present an analysis of the joint GCLF of the two galaxies, making use of new HST photometry and Keck spectroscopy, and a recently improved distance measurement. We apply a homogeneous photometric selection method to the combined GC sample of DF2 and DF4. The new analysis shows that the peak of the combined GC luminosity function remains at $M_V approx -9$ mag. In addition, we find a subpopulation of less luminous GCs at $M_V approx -7.5$ mag, where the near-universal GCLF peak is located. The number of GCs in the magnitude range of $-5$ to $-8$ is $7.1_{-4.34}^{+7.33}$ in DF2 and $8.6_{-4.83}^{+7.74}$ in DF4, similar to that expected from other galaxies of the same luminosity. The total GC number between $M_V$ of $-5$ to $-11$ is $18.5_{-4.42}^{+8.99}$ for DF2 and $18.6_{-4.92}^{+9.37}$ for DF4, calculated from the background-subtracted GCLF. The updated total number of GCs in both galaxies is $37^{+11.08}_{-6.54}$. The number of GCs do not scale with the halo mass in either DF2 or DF4, suggesting that $N_{GC}$ is not directly determined by the merging of halos.