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Deep Parallel MRI Reconstruction Network Without Coil Sensitivities

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 Added by Wanyu Bian
 Publication date 2020
and research's language is English




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We propose a novel deep neural network architecture by mapping the robust proximal gradient scheme for fast image reconstruction in parallel MRI (pMRI) with regularization function trained from data. The proposed network learns to adaptively combine the multi-coil images from incomplete pMRI data into a single image with homogeneous contrast, which is then passed to a nonlinear encoder to efficiently extract sparse features of the image. Unlike most of existing deep image reconstruction networks, our network does not require knowledge of sensitivity maps, which can be difficult to estimate accurately, and have been a major bottleneck of image reconstruction in real-world pMRI applications. The experimental results demonstrate the promising performance of our method on a variety of pMRI imaging data sets.



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Fast data acquisition in Magnetic Resonance Imaging (MRI) is vastly in demand and scan time directly depends on the number of acquired k-space samples. The data-driven methods based on deep neural networks have resulted in promising improvements, compared to the conventional methods, in image reconstruction algorithms. The connection between deep neural network and Ordinary Differential Equation (ODE) has been observed and studied recently. The studies show that different residual networks can be interpreted as Euler discretization of an ODE. In this paper, we propose an ODE-based deep network for MRI reconstruction to enable the rapid acquisition of MR images with improved image quality. Our results with undersampled data demonstrate that our method can deliver higher quality images in comparison to the reconstruction methods based on the standard UNet network and Residual network.
Fast data acquisition in Magnetic Resonance Imaging (MRI) is vastly in demand and scan time directly depends on the number of acquired k-space samples. Conventional MRI reconstruction methods for fast MRI acquisition mostly relied on different regularizers which represent analytical models of sparsity. However, recent data-driven methods based on deep learning has resulted in promising improvements in image reconstruction algorithms. In this paper, we propose a deep plug-and-play prior framework for parallel MRI reconstruction problems which utilize a deep neural network (DNN) as an advanced denoiser within an iterative method. This, in turn, enables rapid acquisition of MR images with improved image quality. The proposed method was compared with the reconstructions using the clinical gold standard GRAPPA method. Our results with undersampled data demonstrate that our method can deliver considerably higher quality images at high acceleration factors in comparison to clinical gold standard method for MRI reconstructions. Our proposed reconstruction enables an increase in acceleration factor, and a reduction in acquisition time while maintaining high image quality.
Deep learning (DL) has emerged as a tool for improving accelerated MRI reconstruction. A common strategy among DL methods is the physics-based approach, where a regularized iterative algorithm alternating between data consistency and a regularizer is unrolled for a finite number of iterations. This unrolled network is then trained end-to-end in a supervised manner, using fully-sampled data as ground truth for the network output. However, in a number of scenarios, it is difficult to obtain fully-sampled datasets, due to physiological constraints such as organ motion or physical constraints such as signal decay. In this work, we tackle this issue and propose a self-supervised learning strategy that enables physics-based DL reconstruction without fully-sampled data. Our approach is to divide the acquired sub-sampled points for each scan into training and validation subsets. During training, data consistency is enforced over the training subset, while the validation subset is used to define the loss function. Results show that the proposed self-supervised learning method successfully reconstructs images without fully-sampled data, performing similarly to the supervised approach that is trained with fully-sampled references. This has implications for physics-based inverse problem approaches for other settings, where fully-sampled data is not available or possible to acquire.
We present a deep network interpolation strategy for accelerated parallel MR image reconstruction. In particular, we examine the network interpolation in parameter space between a source model that is formulated in an unrolled scheme with L1 and SSIM losses and its counterpart that is trained with an adversarial loss. We show that by interpolating between the two different models of the same network structure, the new interpolated network can model a trade-off between perceptual quality and fidelity.
Compressed Sensing MRI (CS-MRI) has shown promise in reconstructing under-sampled MR images, offering the potential to reduce scan times. Classical techniques minimize a regularized least-squares cost function using an expensive iterative optimization procedure. Recently, deep learning models have been developed that model the iterative nature of classical techniques by unrolling iterations in a neural network. While exhibiting superior performance, these methods require large quantities of ground-truth images and have shown to be non-robust to unseen data. In this paper, we explore a novel strategy to train an unrolled reconstruction network in an unsupervised fashion by adopting a loss function widely-used in classical optimization schemes. We demonstrate that this strategy achieves lower loss and is computationally cheap compared to classical optimization solvers while also exhibiting superior robustness compared to supervised models. Code is available at https://github.com/alanqrwang/HQSNet.
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