We consider the effects of weak gravitational lensing on observations of 196 spectroscopically confirmed Type Ia Supernovae (SNe Ia) from years 1 to 3 of the Dark Energy Survey (DES). We simultaneously measure both the angular correlation function and the non-Gaussian skewness caused by weak lensing. This approach has the advantage of being insensitive to the intrinsic dispersion of SNe Ia magnitudes. We model the amplitude of both effects as a function of $sigma_8$, and find $sigma_8 = 1.2^{+0.9}_{-0.8}$. We also apply our method to a subsample of 488 SNe from the Joint Light-curve Analysis (JLA) (chosen to match the redshift range we use for this work), and find $sigma_8 = 0.8^{+1.1}_{-0.7}$. The comparable uncertainty in $sigma_8$ between DES-SN and the larger number of SNe from JLA highlights the benefits of homogeneity of the DES-SN sample, and improvements in the calibration and data analysis.