No Arabic abstract
Pair interactions between active particles need not follow Newtons third law. In this work we propose a continuum model of pattern formation due to non-reciprocal interaction between multiple species of scalar active matter. The classical Cahn-Hilliard model is minimally modified by supplementing the equilibrium Ginzburg-Landau dynamics with particle number conserving currents which cannot be derived from a free energy, reflecting the microscopic departure from action-reaction symmetry. The strength of the asymmetry in the interaction determines whether the steady state exhibits a macroscopic phase separation or a traveling density wave displaying global polar order. The latter structure, which is equivalent to an active self-propelled smectic phase, coarsens via annihilation of defects, whereas the former structure undergoes Ostwald ripening. The emergence of traveling density waves, which is a clear signature of broken time-reversal symmetry in this active system, is a generic feature of any multi-component mixture with microscopic non-reciprocal interactions.
Recently we considered a stochastic discrete model which describes fronts of cells invading a wound cite{KSS}. In the model cells can move, proliferate, and experience cell-cell adhesion. In this work we focus on a continuum description of this phenomenon by means of a generalized Cahn-Hilliard equation (GCH) with a proliferation term. As in the discrete model, there are two interesting regimes. For subcritical adhesion, there are propagating pulled fronts, similarly to those of Fisher-Kolmogorov equation. The problem of front velocity selection is examined, and our theoretical predictions are in a good agreement with a numerical solution of the GCH equation. For supercritical adhesion, there is a nontrivial transient behavior, where density profile exhibits a secondary peak. To analyze this regime, we investigated relaxation dynamics for the Cahn-Hilliard equation without proliferation. We found that the relaxation process exhibits self-similar behavior. The results of continuum and discrete models are in a good agreement with each other for the different regimes we analyzed.
Collective motion is often modeled within the framework of active fluids, where the constituent active particles, when interactions with other particles are switched off, perform normal diffusion at long times. However, in biology, single-particle superdiffusion and fat-tailed displacement statistics are also widespread. The collective properties of interacting systems exhibiting such anomalous diffusive dynamics, which we call active Levy matter, cannot be captured by current active fluid theories. Here, we formulate a hydrodynamic theory of active Levy matter by coarse-graining a microscopic model of aligning polar active particles that perform superdiffusion akin to Levy flights. Applying a linear stability analysis on the hydrodynamic equations at the onset of collective motion, we find that, in contrast to its conventional counterpart, the order-disorder transition can become critical. We then estimate the corresponding critical exponents by finite size scaling analysis of numerical simulations. Our work highlights the novel physics in active matter that integrates both anomalous diffusive motility and inter-particle interactions.
Biomolecular condensates in cells are often rich in catalytically-active enzymes. This is particularly true in the case of the large enzymatic complexes known as metabolons, which contain different enzymes that participate in the same catalytic pathway. One possible explanation for this self-organization is the combination of the catalytic activity of the enzymes and a chemotactic response to gradients of their substrate, which leads to a substrate-mediated effective interaction between enzymes. These interactions constitute a purely non-equilibrium effect and show exotic features such as non-reciprocity. Here, we analytically study a model describing the phase separation of a mixture of such catalytically-active particles. We show that a Michaelis-Menten-like dependence of the particles activities manifests itself as a screening of the interactions, and that a mixture of two differently-sized active species can exhibit phase separation with transient oscillations. We also derive a rich stability phase diagram for a mixture of two species with both concentration-dependent activity and size dispersity. This work highlights the variety of possible phase separation behaviours in mixtures of chemically-active particles, which provides an alternative pathway to the passive interactions more commonly associated with phase separation in cells. Our results highlight non-equilibrium organizing principles that can be important for biologically relevant liquid-liquid phase separation.
Anomalous diffusion, manifest as a nonlinear temporal evolution of the position mean square displacement, and/or non-Gaussian features of the position statistics, is prevalent in biological transport processes. Likewise, collective behavior is often observed to emerge spontaneously from the mutual interactions between constituent motile units in biological systems. Examples where these phenomena can be observed simultaneously have been identified in recent experiments on bird flocks, fish schools and bacterial swarms. These results pose an intriguing question, which cannot be resolved by existing theories of active matter: How is the collective motion of these systems affected by the anomalous diffusion of the constituent units? Here, we answer this question for a microscopic model of active Levy matter -- a collection of active particles that perform superdiffusion akin to a Levy flight and interact by promoting polar alignment of their orientations. We present in details the derivation of the hydrodynamic equations of motion of the model, obtain from these equations the criteria for a disordered or ordered state, and apply linear stability analysis on these states at the onset of collective motion. Our analysis reveals that the disorder-order phase transition in active Levy matter is critical, in contrast to ordinary active fluids where the phase transition is, instead, first-order. Correspondingly, we estimate the critical exponents of the transition by finite size scaling analysis and use these numerical estimates to relate our findings to known universality classes. These results highlight the novel physics exhibited by active matter integrating both anomalous diffusive single-particle motility and inter-particle interactions.
Brownian motion is widely used as a paradigmatic model of diffusion in equilibrium media throughout the physical, chemical, and biological sciences. However, many real world systems, particularly biological ones, are intrinsically out-of-equilibrium due to the energy-dissipating active processes underlying their mechanical and dynamical features. The diffusion process followed by a passive tracer in prototypical active media such as suspensions of active colloids or swimming microorganisms indeed differs significantly from Brownian motion, manifest in a greatly enhanced diffusion coefficient, non-Gaussian tails of the displacement statistics, and crossover phenomena from non-Gaussian to Gaussian scaling. While such characteristic features have been extensively observed in experiments, there is so far no comprehensive theory explaining how they emerge from the microscopic active dynamics. Here we present a theoretical framework of the enhanced tracer diffusion in an active medium from its microscopic dynamics by coarse-graining the hydrodynamic interactions between the tracer and the active particles as a stochastic process. The tracer is shown to follow a non-Markovian coloured Poisson process that accounts quantitatively for all empirical observations. The theory predicts in particular a long-lived Levy flight regime of the tracer motion with a non-monotonic crossover between two different power-law exponents. The duration of this regime can be tuned by the swimmer density, thus suggesting that the optimal foraging strategy of swimming microorganisms might crucially depend on the density in order to exploit the Levy flights of nutrients. Our framework provides the first validation of the celebrated Levy flight model from a physical microscopic dynamics.