A major issue for the implementation of large scale superconducting quantum circuits is the interaction with interfacial two-level system defects (TLS) that leads to qubit relaxation and impedes qubit operation in certain frequency ranges that also drift in time. Another major challenge comes from non-equilibrium quasiparticles (QPs) that result in qubit dephasing and relaxation. In this work we show that such QPs can also serve as a source of TLS. Using spectral and temporal mapping of TLS-induced fluctuations in frequency tunable resonators, we identify a subset of the general TLS population that are highly coherent TLS with a low reconfiguration temperature $sim$ 300 mK, and a non-uniform density of states. These properties can be understood if these TLS are formed by QPs trapped in shallow subgap states formed by spatial fluctutations of the superconducting order parameter $Delta$. Magnetic field measurements of one such TLS reveals a link to superconductivity. Our results imply that trapped QPs can induce qubit relaxation.
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