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Active matter, microreversibility, and thermodynamics

106   0   0.0 ( 0 )
 Added by P. Gaspard
 Publication date 2020
  fields Physics
and research's language is English




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Active matter, comprising many active agents interacting and moving in fluids or more complex environments, is a commonly occurring state of matter in biological and physical systems. By its very nature active matter systems exist in nonequilibrium states. In this paper the active agents are small Janus colloidal particles that use chemical energy provided by chemical reactions occurring on their surfaces for propulsion through a diffusiophoretic mechanism. As a result of interactions among these colloids, either directly or through fluid velocity and concentration fields, they may act collectively to form structures such as dynamic clusters. A general nonequilibrium thermodynamics framework for the description of such systems is presented that accounts for both self-diffusiophoresis and diffusiophoresis due to external concentration gradients, and is consistent with microreversibility. It predicts the existence of a reciprocal effect of diffusiophoresis back onto the reaction rate for the entire collection of colloids in the system, as well as the existence of a clustering instability that leads to nonequilibrium inhomogeneous system states.



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This article summarizes some of the open questions in the field of active matter that have emerged during Active20, a nine-week program held at the Kavli Institute for Theoretical Physics (KITP) in Spring 2020. The article does not provide a review of the field, but rather a personal view of the authors, informed by contributions of all participants, on new directions in active matter research. The topics highlighted include: the ubiquitous occurrence of spontaneous flows and active turbulence and the theoretical and experimental challenges associated with controlling and harnessing such flows; the role of motile topological defects in ordered states of active matter and their possible biological relevance; the emergence of non-reciprocal effective interactions and the role of chirality in active systems and their intriguing connections to non-Hermitian quantum mechanics; the progress towards a formulation of the thermodynamics of active systems thanks to the feedback between theory and experiments; the impact of the active matter framework on our understanding of the emergent mechanics of biological tissue. These seemingly diverse phenomena all stem from the defining property of active matter - assemblies of self-driven entities that individually break time-reversal symmetry and collectively organize in a rich variety of nonequilibrium states.
Conspectus: The ability to navigate in chemical gradients, called chemotaxis, is crucial for the survival of microorganisms. It allows them to find food and to escape from toxins. Many microorganisms can produce the chemicals to which they respond themselves and use chemotaxis for signalling which can be seen as a basic form of communication. Remarkably, the past decade has let to the development of synthetic microswimmers like e.g. autophoretic Janus colloids, which can self-propel through a solvent, analogously to bacteria and other microorganims. The mechanism underlying their self-propulsion involves the production of certain chemicals. The same chemicals involved in the self-propulsion mechanism also act on other microswimmers and bias their swimming direction towards (or away from) the producing microswimmer. Synthetic microswimmers therefore provide a synthetic analogue to chemotactic motile microorganisms. When these interactions are attractive, they commonly lead to clusters, even at low particle density. These clusters may either proceed towards macrophase separation, resembling Dictyostelium aggregation, or, as shown very recently, lead to dynamic clusters of self-limited size (dynamic clustering) as seen in experiments in autophoretic Janus colloids. Besides the classical case where chemical interactions are attractive, this Account discusses, as its main focus, repulsive chemical interactions, which can create a new and less known avenue to pattern formation in active systems leading to a variety of pattern, including clusters which are surrounded by shells of chemicals, travelling waves and more complex continously reshaping patterns. In all these cases `synthetic signalling can crucially determine the collective behavior of synthetic microswimmer ensembles and can be used as a design principle to create patterns in motile active particles.
66 - L. Salasnich 2006
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Active biological systems reside far from equilibrium, dissipating heat even in their steady state, thus requiring an extension of conventional equilibrium thermodynamics and statistical mechanics. In this Letter, we have extended the emerging framework of stochastic thermodynamics to active matter. In particular, for the active Ornstein-Uhlenbeck model, we have provided consistent definitions of thermodynamic quantities such as work, energy, heat, entropy, and entropy production at the level of single, stochastic trajectories and derived related fluctuation relations. We have developed a generalization of the Clausius inequality, which is valid even in the presence of the non-Hamiltonian dynamics underlying active matter systems. We have illustrated our results with explicit numerical studies.
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