Subscribe to the gold package and get unlimited access to Shamra Academy
Register a new userStructure and dynamics of hydrodynamically interacting finite-size Brownian particles in a spherical cavity: spheres and cylinders
80
0
0.0
(
0
)
Ask ChatGPT about the research
No Arabic abstract
The structure and dynamics of confined suspensions of particles of arbitrary shape is of interest in multiple disciplines, from biology to engineering. Theoretical studies are often limited by the complexity of long-range particle-particle and particle-wall forces, including many-body fluctuating hydrodynamic interactions. Here, we report a computational study on the diffusion of spherical and cylindrical particles confined in a spherical cavity. We rely on an Immersed-Boundary General geometry Ewald-like method to capture lubrication and long-range hydrodynamics, and include appropriate non-slip conditions at the confining walls. A Chebyshev polynomial approximation is used to satisfy the fluctuation-dissipation theorem for the Brownian suspension. We explore how lubrication, long-range hydrodynamics, particle volume fraction and shape affect the equilibrium structure and the diffusion of the particles. It is found that once the particle volume fraction is greater than $10%$, the particles start to form layered aggregates that greatly influence particle dynamics. Hydrodynamic interactions strongly influence the particle diffusion by inducing spatially dependent short-time diffusion coefficients, stronger wall effects on the particle diffusion towards the walls, and a sub-diffusive regime --caused by crowding-- in the long-time particle mobility. The level of asymmetry of the cylindrical particles considered here is enough to induce an orientational order in the layered structure, decreasing the diffusion rate and facilitating a transition to the crowded mobility regime at low particle concentrations. Our results offer fundamental insights into the diffusion and distribution of globular and fibrillar proteins inside cells.
rate research
Read More
Considering a granular fluid of inelastic smooth hard spheres we discuss the conditions delineating the rheological regimes comprising Newtonian, Bagnoldian, shear thinning, and shear thickening behavior. Developing a kinetic theory, valid at finite shear rates and densities around the glass transition density, we predict the viscosity and Bagnold coefficient at practically relevant values of the control parameters. The determination of full flow curves relating the shear stress $sigma$ to the shear rate $dotgamma$, and predictions of the yield stress complete our discussion of granular rheology derived from first principles.
We derive from first principles the mechanical pressure $P$, defined as the force per unit area on a bounding wall, in a system of spherical, overdamped, active Brownian particles at density $rho$. Our exact result relates $P$, in closed form, to bulk correlators and shows that (i) $P(rho)$ is a state function, independent of the particle-wall interaction; (ii) interactions contribute two terms to $P$, one encoding the slow-down that drives motility-induced phase separation, and the other a direct contribution well known for passive systems; (iii) $P(rho)$ is equal in coexisting phases. We discuss the consequences of these results for the motility-induced phase separation of active Brownian particles, and show that the densities at coexistence do not satisfy a Maxwell construction on $P$.
We present an explicit and simple approximation for the superadiabatic excess (over ideal gas) free power functional, admitting the study of the nonequilibrium dynamics of overdamped Brownian many-body systems. The functional depends on the local velocity gradient and is systematically obtained from treating the microscopic stress distribution as a conjugate field. The resulting superadiabatic forces are beyond dynamical density functional theory and are of viscous nature. Their high accuracy is demonstrated by comparison to simulation results.
We consider the active Brownian particle (ABP) model for a two-dimensional microswimmer with fixed speed, whose direction of swimming changes according to a Brownian process. The probability density for the swimmer evolves according to a Fokker-Planck equation defined on the configuration space, whose structure depends on the swimmers shape, center of rotation and domain of swimming. We enforce zero probability flux at the boundaries of configuration space. We derive a reduced equation for a swimmer in an infinite channel, in the limit of small rotational diffusivity, and find that the invariant density depends strongly on the swimmers precise shape and center of rotation. We also give a formula for the mean reversal time: the expected time taken for a swimmer to completely reverse direction in the channel. Using homogenization theory, we find an expression for the effective longitudinal diffusivity of a swimmer in the channel, and show that it is bounded by the mean reversal time.
Dynamics of regular clusters of many non-touching particles falling under gravity in a viscous fluid at low Reynolds number are analysed within the point-particle model. Evolution of two families of particle configurations is determined: 2 or 4 regular horizontal polygons (called `rings) centred above or below each other. Two rings fall together and periodically oscillate. Four rings usually separate from each other with chaotic scattering. For hundreds of thousands of initial configurations, a map of the cluster lifetime is evaluated, where the long-lasting clusters are centred around periodic solutions for the relative motions, and surrounded by regions of the chaotic scattering,in a similar way as it was observed by Janosi et al. (1997) for three particles only. These findings suggest to consider the existence of periodic orbits as a possible physical mechanism of the existence of unstable clusters of particles falling under gravity in a viscous fluid.
Log in to be able to interact and post comments
comments
Fetching comments
Sign in to be able to follow your search criteria
