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Register a new userColonies of threaded rings in excitable media
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A thring is a recent addition to the zoo of spiral wave phenomena found in excitable media and consists of a scroll ring that is threaded by a pair of counter-rotating scroll waves. This arrangement behaves like a particle that swims through the medium. Here, we present the first results on the dynamics, interaction and collective behaviour of several thrings via numerical simulation of the reaction-diffusion equations that model thrings created in chemical experiments. We reveal an attraction between two thrings that leads to a stable bound pair that thwarts their individual locomotion. Furthermore, such a pair emits waves at a higher frequency than a single thring, which protects the pair from the advances of any other thring and rules out the formation of a triplet bound state. As a result, the long-term evolution of a colony of thrings ultimately yields an unusual frozen nonequilibrium state consisting of a collection of pairs accompanied by isolated thrings that are inhibited from further motion by the waves emanating from the pairs.
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Cardiac tissue and the Belousov-Zhabotinsky reaction provide two notable examples of excitable media that support scroll waves, in which a filament core is the source of spiral waves of excitation. Here we consider a novel topological configuration in which a closed filament loop, known as a scroll ring, is threaded by a pair of counter-rotating filaments that are perpendicular to the plane of the ring and end on the boundary of a thin medium. We simulate the dynamics of this threaded ring (thring) in the photosensitive Belousov-Zhabotinsky excitable medium, using the modified Oregonator reaction-diffusion equations. These computations reveal that the threading topology induces an exotic motion in which the thring swims in the plane of the ring. We propose a light templating protocol to create a thring in the photosensitive Belousov-Zhabotinsky medium and provide experimental confirmation that this protocol indeed yields a thring.
We study the dynamics and interaction of coaxial vortex rings in the FitzHugh-Nagumo excitable medium. We find that threading vortex rings with a vortex string results in significant qualitative differences in their evolution and interaction. In particular, threading prevents the annihilation of rings in a head-on collision, allows generic ring overtaking, and can even reverse the direction of motion of a ring. We identify that an important mechanism for producing this new behaviour is that threaded vortex rings interact indirectly via induced twisting of the threading vortex string.
In this paper we present the results of parallel numerical computations of the long-term dynamics of linked vortex filaments in a three-dimensional FitzHugh-Nagumo excitable medium. In particular, we study all torus links with no more than 12 crossings and identify a timescale over which the dynamics is regular in the sense that each link is well-described by a spinning rigid conformation of fixed size that propagates at constant speed along the axis of rotation. We compute the properties of these links and demonstrate that they have a simple dependence on the crossing number of the link for a fixed number of link components. Furthermore, we find that instabilities that exist over longer timescales in the bulk can be removed by boundary interactions that yield stable torus links which settle snugly at the medium boundary. The Borromean rings are used as an example of a non-torus link to demonstrate both the irregular tumbling dynamics that arises in the bulk and its suppression by a tight confining medium. Finally, we investigate the collision of torus links and reveal that this produces a complicated wrestling motion where one torus link can eventually dominate over the other by pushing it into the boundary of the medium.
The FitzHugh-Nagumo equation provides a simple mathematical model of cardiac tissue as an excitable medium hosting spiral wave vortices. Here we present extensive numerical simulations studying long-term dynamics of knotted vortex string solutions for all torus knots up to crossing number 11. We demonstrate that FitzHugh-Nagumo evolution preserves the knot topology for all the examples presented, thereby providing a novel field theory approach to the study of knots. Furthermore, the evolution yields a well-defined minimal length for each knot that is comparable to the ropelength of ideal knots. We highlight the role of the medium boundary in stabilizing the length of the knot and discuss the implications beyond torus knots. By applying Moffatts test we are able to show that there is not a unique attractor within a given knot topology.
Excitable pulses are among the most widespread dynamical patterns that occur in many different systems, ranging from biological cells to chemical reactions and ecological populations. Traditionally, the mutual annihilation of two colliding pulses is regarded as their prototypical signature. Here we show that colliding excitable pulses may exhibit soliton-like crossover and pulse nucleation if the system obeys a mass conservation constraint. In contrast to previous observations in systems without mass conservation, these alternative collision scenarios are robustly observed over a wide range of parameters. We demonstrate our findings using a model of intracellular actin waves since, on time scales of wave propagations over the cell scale, cells obey the conservation of actin monomers. The results provide a key concept to understand the ubiquitous occurrence of actin waves in cells, suggesting why they are so common, and why their dynamics is robust and long-lived.
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