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Register a new userImproving Malaria Parasite Detection from Red Blood Cell using Deep Convolutional Neural Networks
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Malaria is a female anopheles mosquito-bite inflicted life-threatening disease which is considered endemic in many parts of the world. This article focuses on improving malaria detection from patches segmented from microscopic images of red blood cell smears by introducing a deep convolutional neural network. Compared to the traditional methods that use tedious hand engineering feature extraction, the proposed method uses deep learning in an end-to-end arrangement that performs both feature extraction and classification directly from the raw segmented patches of the red blood smears. The dataset used in this study was taken from National Institute of Health named NIH Malaria Dataset. The evaluation metric accuracy and loss along with 5-fold cross validation was used to compare and select the best performing architecture. To maximize the performance, existing standard pre-processing techniques from the literature has also been experimented. In addition, several other complex architectures have been implemented and tested to pick the best performing model. A holdout test has also been conducted to verify how well the proposed model generalizes on unseen data. Our best model achieves an accuracy of almost 97.77%.
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Optimizing the design of solar cell metallizations is one of the ways to improve the performance of solar cells. Recently, it has been shown that Topology Optimization (TO) can be used to design complex metallization patterns for solar cells that lead to improved performance. TO generates unconventional design patterns that cannot be obtained with the traditional shape optimization methods. In this paper, we show that this design process can be improved further using a deep learning inspired strategy. We present SolarNet, a CNN-based reparameterization scheme that can be used to obtain improved metallization designs. SolarNet modifies the optimization domain such that rather than optimizing the electrode material distribution directly, the weights of a CNN model are optimized. The design generated by CNN is then evaluated using the physics equations, which in turn generates gradients for backpropagation. SolarNet is trained end-to-end involving backpropagation through the solar cell model as well as the CNN pipeline. Through application on solar cells of different shapes as well as different busbar geometries, we demonstrate that SolarNet improves the performance of solar cells compared to the traditional TO approach.
The Machine Recognition of Crystallization Outcomes (MARCO) initiative has assembled roughly half a million annotated images of macromolecular crystallization experiments from various sources and setups. Here, state-of-the-art machine learning algorithms are trained and tested on different parts of this data set. We find that more than 94% of the test images can be correctly labeled, irrespective of their experimental origin. Because crystal recognition is key to high-density screening and the systematic analysis of crystallization experiments, this approach opens the door to both industrial and fundamental research applications.
Magnetic resonance imaging (MRI) has been proposed as a complimentary method to measure bone quality and assess fracture risk. However, manual segmentation of MR images of bone is time-consuming, limiting the use of MRI measurements in the clinical practice. The purpose of this paper is to present an automatic proximal femur segmentation method that is based on deep convolutional neural networks (CNNs). This study had institutional review board approval and written informed consent was obtained from all subjects. A dataset of volumetric structural MR images of the proximal femur from 86 subject were manually-segmented by an expert. We performed experiments by training two different CNN architectures with multiple number of initial feature maps and layers, and tested their segmentation performance against the gold standard of manual segmentations using four-fold cross-validation. Automatic segmentation of the proximal femur achieved a high dice similarity score of 0.94$pm$0.05 with precision = 0.95$pm$0.02, and recall = 0.94$pm$0.08 using a CNN architecture based on 3D convolution exceeding the performance of 2D CNNs. The high segmentation accuracy provided by CNNs has the potential to help bring the use of structural MRI measurements of bone quality into clinical practice for management of osteoporosis.
Android, being the most widespread mobile operating systems is increasingly becoming a target for malware. Malicious apps designed to turn mobile devices into bots that may form part of a larger botnet have become quite common, thus posing a serious threat. This calls for more effective methods to detect botnets on the Android platform. Hence, in this paper, we present a deep learning approach for Android botnet detection based on Convolutional Neural Networks (CNN). Our proposed botnet detection system is implemented as a CNN-based model that is trained on 342 static app features to distinguish between botnet apps and normal apps. The trained botnet detection model was evaluated on a set of 6,802 real applications containing 1,929 botnets from the publicly available ISCX botnet dataset. The results show that our CNN-based approach had the highest overall prediction accuracy compared to other popular machine learning classifiers. Furthermore, the performance results observed from our model were better than those reported in previous studies on machine learning based Android botnet detection.
Deep convolutional neural networks(CNNs) have been successful for a wide range of computer vision tasks, including image classification. A specific area of the application lies in digital pathology for pattern recognition in the tissue-based diagnosis of gastrointestinal(GI) diseases. This domain can utilize CNNs to translate histopathological images into precise diagnostics. This is challenging since these complex biopsies are heterogeneous and require multiple levels of assessment. This is mainly due to structural similarities in different parts of the GI tract and shared features among different gut diseases. Addressing this problem with a flat model that assumes all classes (parts of the gut and their diseases) are equally difficult to distinguish leads to an inadequate assessment of each class. Since the hierarchical model restricts classification error to each sub-class, it leads to a more informative model than a flat model. In this paper, we propose to apply the hierarchical classification of biopsy images from different parts of the GI tract and the receptive diseases within each. We embedded a class hierarchy into the plain VGGNet to take advantage of its layers hierarchical structure. The proposed model was evaluated using an independent set of image patches from 373 whole slide images. The results indicate that the hierarchical model can achieve better results than the flat model for multi-category diagnosis of GI disorders using histopathological images.
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