Subscribe to the gold package and get unlimited access to Shamra Academy
Register a new userMIWAE: Deep Generative Modelling and Imputation of Incomplete Data
139
0
0.0
(
0
)
Ask ChatGPT about the research
No Arabic abstract
We consider the problem of handling missing data with deep latent variable models (DLVMs). First, we present a simple technique to train DLVMs when the training set contains missing-at-random data. Our approach, called MIWAE, is based on the importance-weighted autoencoder (IWAE), and maximises a potentially tight lower bound of the log-likelihood of the observed data. Compared to the original IWAE, our algorithm does not induce any additional computational overhead due to the missing data. We also develop Monte Carlo techniques for single and multiple imputation using a DLVM trained on an incomplete data set. We illustrate our approach by training a convolutional DLVM on a static binarisation of MNIST that contains 50% of missing pixels. Leveraging multiple imputation, a convolutional network trained on these incomplete digits has a test performance similar to one trained on complete data. On various continuous and binary data sets, we also show that MIWAE provides accurate single imputations, and is highly competitive with state-of-the-art methods.
rate research
Read More
When a missing process depends on the missing values themselves, it needs to be explicitly modelled and taken into account while doing likelihood-based inference. We present an approach for building and fitting deep latent variable models (DLVMs) in cases where the missing process is dependent on the missing data. Specifically, a deep neural network enables us to flexibly model the conditional distribution of the missingness pattern given the data. This allows for incorporating prior information about the type of missingness (e.g. self-censoring) into the model. Our inference technique, based on importance-weighted variational inference, involves maximising a lower bound of the joint likelihood. Stochastic gradients of the bound are obtained by using the reparameterisation trick both in latent space and data space. We show on various kinds of data sets and missingness patterns that explicitly modelling the missing process can be invaluable.
Several statistical models are given in the form of unnormalized densities, and calculation of the normalization constant is intractable. We propose estimation methods for such unnormalized models with missing data. The key concept is to combine imputation techniques with estimators for unnormalized models including noise contrastive estimation and score matching. In addition, we derive asymptotic distributions of the proposed estimators and construct confidence intervals. Simulation results with truncated Gaussian graphical models and the application to real data of wind direction reveal that the proposed methods effectively enable statistical inference with unnormalized models from missing data.
There are threefold challenges in emotion recognition. First, it is difficult to recognize humans emotional states only considering a single modality. Second, it is expensive to manually annotate the emotional data. Third, emotional data often suffers from missing modalities due to unforeseeable sensor malfunction or configuration issues. In this paper, we address all these problems under a novel multi-view deep generative framework. Specifically, we propose to model the statistical relationships of multi-modality emotional data using multiple modality-specific generative networks with a shared latent space. By imposing a Gaussian mixture assumption on the posterior approximation of the shared latent variables, our framework can learn the joint deep representation from multiple modalities and evaluate the importance of each modality simultaneously. To solve the labeled-data-scarcity problem, we extend our multi-view model to semi-supervised learning scenario by casting the semi-supervised classification problem as a specialized missing data imputation task. To address the missing-modality problem, we further extend our semi-supervised multi-view model to deal with incomplete data, where a missing view is treated as a latent variable and integrated out during inference. This way, the proposed overall framework can utilize all available (both labeled and unlabeled, as well as both complete and incomplete) data to improve its generalization ability. The experiments conducted on two real multi-modal emotion datasets demonstrated the superiority of our framework.
In population synthesis applications, when considering populations with many attributes, a fundamental problem is the estimation of rare combinations of feature attributes. Unsurprisingly, it is notably more difficult to reliably representthe sparser regions of such multivariate distributions and in particular combinations of attributes which are absent from the original sample. In the literature this is commonly known as sampling zeros for which no systematic solution has been proposed so far. In this paper, two machine learning algorithms, from the family of deep generative models,are proposed for the problem of population synthesis and with particular attention to the problem of sampling zeros. Specifically, we introduce the Wasserstein Generative Adversarial Network (WGAN) and the Variational Autoencoder(VAE), and adapt these algorithms for a large-scale population synthesis application. The models are implemented on a Danish travel survey with a feature-space of more than 60 variables. The models are validated in a cross-validation scheme and a set of new metrics for the evaluation of the sampling-zero problem is proposed. Results show how these models are able to recover sampling zeros while keeping the estimation of truly impossible combinations, the structural zeros, at a comparatively low level. Particularly, for a low dimensional experiment, the VAE, the marginal sampler and the fully random sampler generate 5%, 21% and 26%, respectively, more structural zeros per sampling zero generated by the WGAN, while for a high dimensional case, these figures escalate to 44%, 2217% and 170440%, respectively. This research directly supports the development of agent-based systems and in particular cases where detailed socio-economic or geographical representations are required.
Missing data is a crucial issue when applying machine learning algorithms to real-world datasets. Starting from the simple assumption that two batches extracted randomly from the same dataset should share the same distribution, we leverage optimal transport distances to quantify that criterion and turn it into a loss function to impute missing data values. We propose practical methods to minimize these losses using end-to-end learning, that can exploit or not parametric assumptions on the underlying distributions of values. We evaluate our methods on datasets from the UCI repository, in MCAR, MAR and MNAR settings. These experiments show that OT-based methods match or out-perform state-of-the-art imputation methods, even for high percentages of missing values.
suggested questions
Log in to be able to interact and post comments
comments
Fetching comments
Sign in to be able to follow your search criteria
