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Astrophysical code migration into Exascale Era

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 Added by David Goz Dr.
 Publication date 2018
  fields Physics
and research's language is English




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The ExaNeSt and EuroExa H2020 EU-funded projects aim to design and develop an exascale ready computing platform prototype based on low-energy-consumption ARM64 cores and FPGA accelerators. We participate in the application-driven design of the hardware solutions and prototype validation. To carry on this work we are using, among others, Hy-Nbody, a state-of-the-art direct N-body code. Core algorithms of Hy-Nbody have been improved in such a way to increasingly fit them to the exascale target platform. Waiting for the ExaNest prototype release, we are performing tests and code tuning operations on an ARM64 SoC facility: a SLURM managed HPC cluster based on 64-bit ARMv8 Cortex-A72/Cortex-A53 core design and powered by a Mali-T864 embedded GPU. In parallel, we are porting a kernel of Hy-Nbody on FPGA aiming to test and compare the performance-per-watt of our algorithms on different platforms. In this paper we describe how we re-engineered the application and we show first results on ARM SoC.



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High performance computing numerical simulations are today one of the more effective instruments to implement and study new theoretical models, and they are mandatory during the preparatory phase and operational phase of any scientific experiment. New challenges in Cosmology and Astrophysics will require a large number of new extremely computationally intensive simulations to investigate physical processes at different scales. Moreover, the size and complexity of the new generation of observational facilities also implies a new generation of high performance data reduction and analysis tools pushing toward the use of Exascale computing capabilities. Exascale supercomputers cannot be produced today. We discuss the major technological challenges in the design, development and use of such computing capabilities and we will report on the progresses that has been made in the last years in Europe, in particular in the framework of the ExaNeSt European funded project. We also discuss the impact of this new computing resources on the numerical codes in Astronomy and Astrophysics.
The architecture of Exascale computing facilities, which involves millions of heterogeneous processing units, will deeply impact on scientific applications. Future astrophysical HPC applications must be designed to make such computing systems exploitable. The ExaNeSt H2020 EU-funded project aims to design and develop an exascale ready prototype based on low-energy-consumption ARM64 cores and FPGA accelerators. We participate to the design of the platform and to the validation of the prototype with cosmological N-body and hydrodynamical codes suited to perform large-scale, high-resolution numerical simulations of cosmic structures formation and evolution. We discuss our activities on astrophysical applications to take advantage of the underlying architecture.
We describe the magnetohydrodynamics (MHD) code CRONOS, which has been used in astrophysics and space physics studies in recent years. CRONOS has been designed to be easily adaptable to the problem at hand, where the user can expand or exchange core modules or add new functionality to the code. This modularity comes about through its implementation using a C++ class structure. The core components of the code include solvers for both hydrodynamical (HD) and MHD problems. These problems are solved on different rectangular grids, which currently support Cartesian, spherical, and cylindrical coordinates. CRONOS uses a finite-volume description with different approximate Riemann solvers that can be chosen at runtime. Here, we describe the implementation of the code with a view toward its ongoing development. We illustrate the codes potential through several (M)HD test problems and some astrophysical applications.
A method for implementing cylindrical coordinates in the Athena magnetohydrodynamics (MHD) code is described. The extension follows the approach of Athenas original developers and has been designed to alter the existing Cartesian-coordinates code as minimally and transparently as possible. The numerical equations in cylindrical coordinates are formulated to maintain consistency with constrained transport, a central feature of the Athena algorithm, while making use of previously implemented code modules such as the Riemann solvers. Angular-momentum transport, which is critical in astrophysical disk systems dominated by rotation, is treated carefully. We describe modifications for cylindrical coordinates of the higher-order spatial reconstruction and characteristic evolution steps as well as the finite-volume and constrained transport updates. Finally, we present a test suite of standard and novel problems in one-, two-, and three-dimensions designed to validate our algorithms and implementation and to be of use to other code developers. The code is suitable for use in a wide variety of astrophysical applications and is freely available for download on the web.
This paper describes the design and implementation of our new multi-group, multi-dimensional radiation hydrodynamics (RHD) code Fornax and provides a suite of code tests to validate its application in a wide range of physical regimes. Instead of focusing exclusively on tests of neutrino radiation hydrodynamics relevant to the core-collapse supernova problem for which Fornax is primarily intended, we present here classical and rigorous demonstrations of code performance relevant to a broad range of multi-dimensional hydrodynamic and multi-group radiation hydrodynamic problems. Our code solves the comoving-frame radiation moment equations using the M1 closure, utilizes conservative high-order reconstruction, employs semi-explicit matter and radiation transport via a high-order time stepping scheme, and is suitable for application to a wide range of astrophysical problems. To this end, we first describe the philosophy, algorithms, and methodologies of Fornax and then perform numerous stringent code tests, that collectively and vigorously exercise the code, demonstrate the excellent numerical fidelity with which it captures the many physical effects of radiation hydrodynamics, and show excellent strong scaling well above 100k MPI tasks.
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