We present both the experimental and theoretical investigation of a non-trivial electron Landau levels shift in magnetic field in wide ~20 nm HgTe quantum wells: Landau levels split under magnetic fields but become degenerate again when magnetic field increases. We reproduced this behavior qualitatively within an isotropic 6-band Kane model, then using semiclassical calculations we showed this behavior is due to the mixing of the conduction band with total spin 3/2 with the next well subband with spin 1/2 which reduces the average vertical spin from 3/2 to around 1. This change of the average spin changes the Berry phase explaining the evolution of Landau levels under magnetic field.