By using variational Monte Carlo and auxiliary-field quantum Monte Carlo methods, we perform an accurate finite-size scaling of the $s$-wave superconducting order parameter and the pairing correlations for the negative-$U$ Hubbard model at zero temperature in the square lattice. We show that the twist-averaged boundary conditions (TABCs) are extremely important to control finite-size effects and to achieve smooth and accurate extrapolations to the thermodynamic limit. We also show that TABCs is much more efficient in the grand-canonical ensemble rather than in the standard canonical ensemble with fixed number of electrons. The superconducting order parameter as a function of the doping is presented for several values of $|U|/t$ and is found to be significantly smaller than the mean-field BCS estimate already for moderate couplings. This reduction is understood by a variational ansatz able to describe the low-energy behaviour of the superconducting phase, by means of a suitably chosen Jastrow factor including long-range density-density correlations.
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