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Register a new userUnravelling coherences in the FMO complex
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The idea that excitonic state (electronic) coherences are of fundamental importance to natural photosynthesis gained popularity when, a decade ago, slowly dephasing quantum beats were observed in the two-dimensional electronic spectra of the Fenna-Matthews-Olson complex at 77 K. These were assigned to quantum superpositions of excitonic states; a controversial interpretation, as the spectral linewidths suggested fast dephasing arising from strong interactions with the environment. While it has been pointed out that vibrational motion produces similar spectral signatures, concrete assignment of these coherences to distinct physical processes is still lacking. Here we revisit the coherence dynamics of the Fenna-Matthews-Olson complex using polarization-controlled two-dimensional electronic spectroscopy, supported by theoretical modelling. We show that the long-lived quantum beats originate exclusively from vibrational coherences, whereas electronic coherences dephase entirely within 240 fs even at 77 K - a timescale too short to play a significant role in light harvesting. Additionally, we demonstrate that specific vibrational coherences are excited via vibronically coupled states. The detection of vibronic coupling indicates the relevance of this phenomenon for photosynthetic energy transfer.
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Using methods of condensed matter and statistical physics, we examine the transport of excitons through the Fenna-Matthews-Olson (FMO) complex from a receiving antenna to a reaction center. Writing the equations of motion for the exciton creation/annihilation operators, we are able to describe the exciton dynamics, even in the regime when the reorganization energy is of the order of the intra-system couplings. In particular, we obtain the well-known quantum oscillations of the site populations. We determine the exciton transfer efficiency in the presence of a quenching field and protein environment. While the majority of the protein vibronic modes are treated as a heat bath, we address the situation when specific modes are strongly coupled to excitons and examine the effects of these modes on the quantum oscillations and the energy transfer efficiency. We find that, for the vibronic frequencies below 16 meV, the exciton transfer is drastically suppressed. We attribute this effect to the formation of polaronic states where the exciton is transferred back and forth between the two pigments with the absorption/emission of the vibronic quanta, instead of proceeding to the reaction center. The same effect suppresses the quantum beating at the vibronic frequency of 25 meV. We also show that the efficiency of the energy transfer can be enhanced when the vibronic mode strongly couples to the third pigment only, instead of coupling to the entire system.
Much of our knowledge about dynamics and functionality of molecular systems has been achieved with femtosecond time-resolved spectroscopy. Despite extensive technical developments over the past decades, some classes of systems have eluded dynamical studies so far. Here, we demonstrate that superfluid helium nanodroplets, acting as thermal bath of 0.4 K temperature to stabilize weakly bound or reactive systems, are well suited for time-resolved studies of single molecules solvated in the droplet interior. By observing vibrational wavepacket motion of indium dimers (In$_2$) for over 50 ps, we demonstrate that the perturbation imposed by this quantum liquid can be lower by a factor of 10-100 compared to any other solvent, which uniquely allows to study processes depending on long nuclear coherence in a dissipative environment. Furthermore, tailor-made microsolvation environments inside droplets will enable to investigate the solvent influence on intramolecular dynamics in a wide tuning range from molecular isolation to strong molecule-solvent coupling.
The two-dimensional spectroscopy has recently revealed oscillatory behavior of excitation dynamics in molecular systems. However, in the majority of cases it is strongly debated if excitonic or vibrational wavepackets, or evidences of quantum transport have been observed. In this letter, the method for distinguishing between vibrational and excitonic wavepacket motion is presented, based on the phase and amplitude relationships of oscillations of distinct peaks, which has been revealed using fundamental analysis of two-dimensional spectrum of two representative systems.
The Fenna-Matthews-Olson (FMO) protein-pigment complex acts as a molecular wire between the outer antenna system and the reaction center (RC); it is an important model system to study the excitonic energy transfer. Recent crystallographic studies report the existence of an additional (eighth) bacteriochlorophyll a (BChl a). To understand the functionality of this eighth BChl, we simulated the two-dimensional electronic spectra of both the 7-site (apo form) and the 8-site (holo form) variant of the FMO complex from green sulfur bacteria, Prosthecochloris aestuarii. By comparing the difference between the spectrum, it was found that the eighth BChl can affect two different excitonic energy transfer pathways, these being: (1) directly involve in the first pathway 6 $rightarrow$ 3 $rightarrow$ 1 of the apo form model by passing the excitonic energy to exciton 6; and (2) increase the excitonic wave function overlap between excitons 4 and 5 in the second pathway (7 $rightarrow$ 4,5 $rightarrow$ 2 $rightarrow$ 1) and thus increase the possible downward sampling routes across the BChls.
Coherent dynamics of coupled molecules are effectively characterized by the two-dimensional (2D) electronic coherent spectroscopy. Depending on the coupling between electronic and vibrational states, oscillating signals of purely electronic, purely vibrational or mixed origin can be observed. Even in the mixed molecular systems two types of coherent beats having either electronic or vibrational character can be distinguished by analyzing oscillation Fourier maps, constructed from time-resolved 2D spectra. The amplitude of the beatings with the electronic character is heavily affected by the energetic disorder and consequently electronic coherences are quickly dephased. Beatings with the vibrational character depend weakly on the disorder, assuring their long-time survival. We show that detailed modeling of 2D spectroscopy signals of molecular aggregates providesdirect information on the origin of the coherent beatings.
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