Do you want to publish a course? Click here

Random Forest Missing Data Algorithms

94   0   0.0 ( 0 )
 Added by Hemant Ishwaran
 Publication date 2017
and research's language is English




Ask ChatGPT about the research

Random forest (RF) missing data algorithms are an attractive approach for dealing with missing data. They have the desirable properties of being able to handle mixed types of missing data, they are adaptive to interactions and nonlinearity, and they have the potential to scale to big data settings. Currently there are many different RF imputation algorithms but relatively little guidance about their efficacy, which motivated us to study their performance. Using a large, diverse collection of data sets, performance of various RF algorithms was assessed under different missing data mechanisms. Algorithms included proximity imputation, on the fly imputation, and imputation utilizing multivariate unsupervised and supervised splitting---the latter class representing a generalization of a new promising imputation algorithm called missForest. Performance of algorithms was assessed by ability to impute data accurately. Our findings reveal RF imputation to be generally robust with performance improving with increasing correlation. Performance was good under moderate to high missingness, and even (in certain cases) when data was missing not at random.



rate research

Read More

Estimation of individual treatment effect in observational data is complicated due to the challenges of confounding and selection bias. A useful inferential framework to address this is the counterfactual (potential outcomes) model which takes the hypothetical stance of asking what if an individual had received both treatments. Making use of random forests (RF) within the counterfactual framework we estimate individual treatment effects by directly modeling the response. We find accurate estimation of individual treatment effects is possible even in complex heterogeneous settings but that the type of RF approach plays an important role in accuracy. Methods designed to be adaptive to confounding, when used in parallel with out-of-sample estimation, do best. One method found to be especially promising is counterfactual synthetic forests. We illustrate this new methodology by applying it to a large comparative effectiveness trial, Project Aware, in order to explore the role drug use plays in sexual risk. The analysis reveals important connections between risky behavior, drug usage, and sexual risk.
306 - Hanyuan Hang , Xiaoyu Liu , 2019
We propose an algorithm named best-scored random forest for binary classification problems. The terminology best-scored means to select the one with the best empirical performance out of a certain number of purely random tree candidates as each single tree in the forest. In this way, the resulting forest can be more accurate than the original purely random forest. From the theoretical perspective, within the framework of regularized empirical risk minimization penalized on the number of splits, we establish almost optimal convergence rates for the proposed best-scored random trees under certain conditions which can be extended to the best-scored random forest. In addition, we present a counterexample to illustrate that in order to ensure the consistency of the forest, every dimension must have the chance to be split. In the numerical experiments, for the sake of efficiency, we employ an adaptive random splitting criterion. Comparative experiments with other state-of-art classification methods demonstrate the accuracy of our best-scored random forest.
89 - Aude Sportisse 2018
Missing values challenge data analysis because many supervised and unsupervised learning methods cannot be applied directly to incomplete data. Matrix completion based on low-rank assumptions are very powerful solution for dealing with missing values. However, existing methods do not consider the case of informative missing values which are widely encountered in practice. This paper proposes matrix completion methods to recover Missing Not At Random (MNAR) data. Our first contribution is to suggest a model-based estimation strategy by modelling the missing mechanism distribution. An EM algorithm is then implemented, involving a Fast Iterative Soft-Thresholding Algorithm (FISTA). Our second contribution is to suggest a computationally efficient surrogate estimation by implicitly taking into account the joint distribution of the data and the missing mechanism: the data matrix is concatenated with the mask coding for the missing values; a low-rank structure for exponential family is assumed on this new matrix, in order to encode links between variables and missing mechanisms. The methodology that has the great advantage of handling different missing value mechanisms is robust to model specification errors.The performances of our methods are assessed on the real data collected from a trauma registry (TraumaBase ) containing clinical information about over twenty thousand severely traumatized patients in France. The aim is then to predict if the doctors should administrate tranexomic acid to patients with traumatic brain injury, that would limit excessive bleeding.
When a missing process depends on the missing values themselves, it needs to be explicitly modelled and taken into account while doing likelihood-based inference. We present an approach for building and fitting deep latent variable models (DLVMs) in cases where the missing process is dependent on the missing data. Specifically, a deep neural network enables us to flexibly model the conditional distribution of the missingness pattern given the data. This allows for incorporating prior information about the type of missingness (e.g. self-censoring) into the model. Our inference technique, based on importance-weighted variational inference, involves maximising a lower bound of the joint likelihood. Stochastic gradients of the bound are obtained by using the reparameterisation trick both in latent space and data space. We show on various kinds of data sets and missingness patterns that explicitly modelling the missing process can be invaluable.
This paper presents a brand new nonparametric density estimation strategy named the best-scored random forest density estimation whose effectiveness is supported by both solid theoretical analysis and significant experimental performance. The terminology best-scored stands for selecting one density tree with the best estimation performance out of a certain number of purely random density tree candidates and we then name the selected one the best-scored random density tree. In this manner, the ensemble of these selected trees that is the best-scored random density forest can achieve even better estimation results than simply integrating trees without selection. From the theoretical perspective, by decomposing the error term into two, we are able to carry out the following analysis: First of all, we establish the consistency of the best-scored random density trees under $L_1$-norm. Secondly, we provide the convergence rates of them under $L_1$-norm concerning with three different tail assumptions, respectively. Thirdly, the convergence rates under $L_{infty}$-norm is presented. Last but not least, we also achieve the above convergence rates analysis for the best-scored random density forest. When conducting comparative experiments with other state-of-the-art density estimation approaches on both synthetic and real data sets, it turns out that our algorithm has not only significant advantages in terms of estimation accuracy over other methods, but also stronger resistance to the curse of dimensionality.
comments
Fetching comments Fetching comments
Sign in to be able to follow your search criteria
mircosoft-partner

هل ترغب بارسال اشعارات عن اخر التحديثات في شمرا-اكاديميا