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Register a new userA quantum protective mechanism in photosynthesis
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Since the emergence of oxygenic photosynthesis, living systems have developed protective mechanisms against reactive oxygen species. During charge separation in photosynthetic reaction centres, triplet states can react with molecular oxygen generating destructive singlet oxygen. The triplet product yield in bacteria is observed to be reduced by weak magnetic fields. Reaction centres from plants photosystem II share many features with bacterial reaction centres, including a high-spin iron whose function has remained obscure. To explain observations that the magnetic field effect is reduced by the iron, we propose that its fast-relaxing spin plays a protective role in photosynthesis by generating an effective magnetic field. We consider a simple model of the system, derive an analytical expression for the effective magnetic field and analyse the resulting triplet yield reduction. The protective mechanism is robust for realistic parameter ranges, constituting a clear example of a quantum effect playing a macroscopic role vital for life.
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Is there a functional role for quantum mechanics or coherent quantum effects in biological processes? While this question is as old as quantum theory, only recently have measurements on biological systems on ultra-fast time-scales shed light on a possible answer. In this review we give an overview of the two main candidates for biological systems which may harness such functional quantum effects: photosynthesis and magnetoreception. We discuss some of the latest evidence both for and against room temperature quantum coherence, and consider whether there is truly a functional role for coherence in these biological mechanisms. Finally, we give a brief overview of some more speculative examples of functional quantum biology including the sense of smell, long-range quantum tunneling in proteins, biological photoreceptors, and the flow of ions across a cell membrane.
Photosystem II is crucial for life on Earth as it provides oxygen as a result of photoinduced electron transfer and water splitting reactions. The excited state dynamics of the photosystem II-reaction center (PSII-RC) has been a matter of vivid debate because the absorption spectra of the embedded chromophores significantly overlap and hence it is extremely difficult to distinguish transients. Here, we report the two-dimensional electronic-vibrational spectroscopic study of the PSII-RC. The simultaneous resolution along both the visible excitation and infrared detection axis is crucial in allowing for the character of the excitonic states and interplay between them to be clearly distinguished. In particular, this work demonstrates that the mixed exciton-charge transfer state, previously proposed to be responsible for the far-red light operation of photosynthesis, is characterized by the Chl$_{rm D1}^+$Phe$^-$ radical pair and can be directly prepared upon photoexcitation. Further, we find that the initial electron acceptor in the PSII-RC is Phe, rather than P$_{rm D1}$, regardless of excitation wavelength.
The local conservation of a physical quantity whose distribution changes with time is mathematically described by the continuity equation. The corresponding time parameter, however, is defined with respect to an idealized classical clock. We consider what happens when this classical time is replaced by a non-relativistic quantum-mechanical description of the clock. From the clock-dependent Schrodinger equation (as analogue of the time-dependent Schrodinger equation) we derive a continuity equation, where, instead of a time-derivative, an operator occurs that depends on the flux (probability current) density of the clock. This clock-dependent continuity equation can be used to analyze the dynamics of a quantum system and to study degrees of freedom that may be used as internal clocks for an approximate description of the dynamics of the remaining degrees of freedom. As an illustration, we study a simple model for coupled electron-nuclear dynamics and interpret the nuclei as quantum clock for the electronic motion. We find that whenever the Born-Oppenheimer approximation is valid, the continuity equation shows that the nuclei are the only relevant clock for the electrons.
We study protective quantum measurements in the presence of an environment and decoherence. We consider the model of a protectively measured qubit that also interacts with a spin environment during the measurement. We investigate how the coupling to the environment affects the two characteristic properties of a protective measurement, namely, (i) the ability to leave the state of the system approximately unchanged and (ii) the transfer of information about expectation values to the apparatus pointer. We find that even when the interaction with the environment is weak enough not to lead to appreciable decoherence of the initial qubit state, it causes a significant broadening of the probability distribution for the position of the apparatus pointer at the conclusion of the measurement. This washing out of the pointer position crucially diminishes the accuracy with which the desired expectation values can be measured from a readout of the pointer. We additionally show that even when the coupling to the environment is chosen such that the state of the system is immune to decoherence, the environment may still detrimentally affect the pointer readout.
Making measurements on single quantum systems is considered difficult, almost impossible if the state is a-priori unknown. Protective measurements suggest a possibility to measure single quantum systems and gain some new information in the process. Protective measurement is described, both in the original and generalized form. The degree to which the system and the apparatus remain entangled in a protective measurement, is assessed. A possible experimental test of protective measurements is discussed.
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