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Register a new userThickness Mapping of Eleven Retinal Layers in Normal Eyes Using Spectral Domain Optical Coherence Tomography
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Added by
Rahele Kafieh
Publication date
2013
fields
Informatics Engineering
and research's language is
English
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Purpose. This study was conducted to determine the thickness map of eleven retinal layers in normal subjects by spectral domain optical coherence tomography (SD-OCT) and evaluate their association with sex and age. Methods. Mean regional retinal thickness of 11 retinal layers were obtained by automatic three-dimensional diffusion-map-based method in 112 normal eyes of 76 Iranian subjects. Results. The thickness map of central foveal area in layer 1, 3, and 4 displayed the minimum thickness (P<0.005 for all). Maximum thickness was observed in nasal to the fovea of layer 1 (P<0.001) and in a circular pattern in the parafoveal retinal area of layers 2, 3 and 4 and in central foveal area of layer 6 (P<0.001). Temporal and inferior quadrants of the total retinal thickness and most of other quadrants of layer 1 were significantly greater in the men than in the women. Surrounding eight sectors of total retinal thickness and a limited number of sectors in layer 1 and 4 significantly correlated with age. Conclusion. SD-OCT demonstrated the three-dimensional thickness distribution of retinal layers in normal eyes. Thickness of layers varied with sex and age and in different sectors. These variables should be considered while evaluating macular thickness.
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Optical coherence tomography (OCT) is a powerful and noninvasive method for retinal imaging. In this paper, we introduce a fast segmentation method based on a new variant of spectral graph theory named diffusion maps. The research is performed on spectral domain (SD) OCT images depicting macular and optic nerve head appearance. The presented approach does not require edge-based image information and relies on regional image texture. Consequently, the proposed method demonstrates robustness in situations of low image contrast or poor layer-to-layer image gradients. Diffusion mapping is applied to 2D and 3D OCT datasets composed of two steps, one for partitioning the data into important and less important sections, and another one for localization of internal layers.In the first step, the pixels/voxels are grouped in rectangular/cubic sets to form a graph node.The weights of a graph are calculated based on geometric distances between pixels/voxels and differences of their mean intensity.The first diffusion map clusters the data into three parts, the second of which is the area of interest. The other two sections are eliminated from the remaining calculations. In the second step, the remaining area is subjected to another diffusion map assessment and the internal layers are localized based on their textural similarities.The proposed method was tested on 23 datasets from two patient groups (glaucoma and normals). The mean unsigned border positioning errors(mean - SD) was 8.52 - 3.13 and 7.56 - 2.95 micrometer for the 2D and 3D methods, respectively.
With the introduction of spectral-domain optical coherence tomography (SDOCT), much larger image datasets are routinely acquired compared to what was possible using the previous generation of time-domain OCT. Thus, there is a critical need for the development of 3D segmentation methods for processing these data. We present here a novel 3D automatic segmentation method for retinal OCT volume data. Briefly, to segment a boundary surface, two OCT volume datasets are obtained by using a 3D smoothing filter and a 3D differential filter. Their linear combination is then calculated to generate new volume data with an enhanced boundary surface, where pixel intensity, boundary position information, and intensity changes on both sides of the boundary surface are used simultaneously. Next, preliminary discrete boundary points are detected from the A-Scans of the volume data. Finally, surface smoothness constraints and a dynamic threshold are applied to obtain a smoothed boundary surface by correcting a small number of error points. Our method can extract retinal layer boundary surfaces sequentially with a decreasing search region of volume data. We performed automatic segmentation on eight human OCT volume datasets acquired from a commercial Spectralis OCT system, where each volume of data consisted of 97 OCT images with a resolution of 496 512; experimental results show that this method can accurately segment seven layer boundary surfaces in normal as well as some abnormal eyes.
The intensity levels allowed by safety standards (ANSI or ICNIRP) limit the amount of light that can be used in a clinical setting to image highly scattering or absorptive tissues with Optical Coherence Tomography (OCT). To achieve high-sensitivity imaging at low intensity levels, we adapt a detection scheme -- which is used in quantum optics for providing information about spectral correlations of photons -- into a standard spectral domain OCT system. This detection scheme is based on the concept of Dispersive Fourier Transformation, where a fibre introduces a wavelength-dependent time delay measured by a single-pixel detector, usually a high-speed photoreceiver. Here, we use a fast Superconducting Single-Photon Detector (SSPD) as a single-pixel detector and obtain images of a glass stack and a slice of onion at the intensity levels of the order of 10 pW. We also provide a formula for a depth-dependent sensitivity fall-off in such a detection scheme which can be treated as a temporal equivalent of diffraction-grating-based spectrometers.
Optical coherence tomography (OCT) is a 3D imaging technique that was introduced in 1991 [Science 254, 1178 (1991); Applied Optics 31, 919 (1992)]. Since 2018 there has been growing interest in a new type of OCT scheme based on the use of so-called nonlinear interferometers, interferometers that contain optical parametric amplifiers. Some of these OCT schemes are based on the idea of induced coherence [Physical Review A 97, 023824 (2018)], while others make use of an SU(1,1) interferometer [Quantum Science and Technology 3 025008 (2018)]. What are the differences and similarities between the output signals measured in standard OCT and in these new OCT schemes? Are there any differences between OCT schemes based on induced coherence and on an SU(1,1) interferometer? Differences can unveil potential advantages of OCT based on nonlinear interferometers when compared with conventional OCT schemes. Similarities might benefit the schemes based on nonlinear interferometers from the wealth of research and technology related to conventional OCT schemes. In all cases we will consider the scheme where the optical sectioning of the sample is obtained by measuring the output signal spectrum (spectral, or Fourier-domain OCT), since it shows better performance in terms of speed and sensitivity than its counterpart time-domain OCT.
Automated drusen segmentation in retinal optical coherence tomography (OCT) scans is relevant for understanding age-related macular degeneration (AMD) risk and progression. This task is usually performed by segmenting the top/bottom anatomical interfaces that define drusen, the outer boundary of the retinal pigment epithelium (OBRPE) and the Bruchs membrane (BM), respectively. In this paper we propose a novel multi-decoder architecture that tackles drusen segmentation as a multitask problem. Instead of training a multiclass model for OBRPE/BM segmentation, we use one decoder per target class and an extra one aiming for the area between the layers. We also introduce connections between each class-specific branch and the additional decoder to increase the regularization effect of this surrogate task. We validated our approach on private/public data sets with 166 early/intermediate AMD Spectralis, and 200 AMD and control Bioptigen OCT volumes, respectively. Our method consistently outperformed several baselines in both layer and drusen segmentation evaluations.
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