Neutron stars may harbour the true ground state of matter in the form of strange quark matter. If present, this type of matter is expected to be a color superconductor, a consequence of quark pairing with respect to the color/flavor degrees of freedom. The stellar magnetic field threading the quark core becomes a color-magnetic admixture and, in the event that superconductivity is of type II, leads to the formation of color-magnetic vortices. In this Letter we show that the volume-averaged color-magnetic vortex tension force should naturally lead to a significant degree of non-axisymmetry in systems like radio pulsars. We show that gravitational radiation from such color-magnetic `mountains in young pulsars like the Crab and Vela could be observable by the future Einstein Telescope, thus becoming a probe of paired quark matter in neutron stars. The detectability threshold can be pushed up toward the sensitivity level of Advanced LIGO if we invoke an interior magnetic field about a factor ten stronger than the surface polar field.
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